Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.42■□□□□ 0.22
TO15178 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TO15178 AC009949.1-201ENST00000623048 1830 ntBASIC16.42■□□□□ 0.22
TO15178 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TO15178 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TO15178 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.42■□□□□ 0.22
TO15178 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
TO15178 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.42■□□□□ 0.22
TO15178 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TO15178 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TO15178 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.41■□□□□ 0.22
TO15178 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.41■□□□□ 0.22
TO15178 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TO15178 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TO15178 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.41■□□□□ 0.22
TO15178 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TO15178 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TO15178 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.41■□□□□ 0.22
TO15178 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.41■□□□□ 0.22
TO15178 AC074051.2-201ENST00000565115 352 ntBASIC16.41■□□□□ 0.22
TO15178 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.41■□□□□ 0.22
TO15178 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.41■□□□□ 0.22
TO15178 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.41■□□□□ 0.22
TO15178 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TO15178 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TO15178 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TO15178 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TO15178 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.4■□□□□ 0.22
TO15178 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.4■□□□□ 0.22
TO15178 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.4■□□□□ 0.22
TO15178 BX276092.7-203ENST00000637198 1536 ntBASIC16.4■□□□□ 0.22
TO15178 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TO15178 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.4■□□□□ 0.22
TO15178 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TO15178 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.4■□□□□ 0.22
TO15178 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TO15178 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 COX5BP2-201ENST00000392354 334 ntBASIC16.4■□□□□ 0.22
TO15178 POM121L3P-201ENST00000419331 1163 ntBASIC16.4■□□□□ 0.22
TO15178 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.4■□□□□ 0.22
TO15178 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TO15178 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.4■□□□□ 0.22
TO15178 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.4■□□□□ 0.22
TO15178 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TO15178 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.4■□□□□ 0.22
TO15178 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TO15178 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TO15178 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TO15178 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TO15178 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TO15178 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TO15178 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TO15178 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TO15178 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.39■□□□□ 0.21
TO15178 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TO15178 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TO15178 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TO15178 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TO15178 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.39■□□□□ 0.21
TO15178 AC007967.3-201ENST00000434308 558 ntBASIC16.39■□□□□ 0.21
TO15178 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TO15178 NUS1P1-201ENST00000446295 882 ntBASIC16.39■□□□□ 0.21
TO15178 MINOS1P3-201ENST00000457048 203 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms