Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDH17O14917 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PCDH17O14917 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH17O14917 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH17O14917 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDH17O14917 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH17O14917 PRELID1P1-202ENST00000567272 903 ntBASIC17.04■□□□□ 0.32
PCDH17O14917 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.04■□□□□ 0.32
PCDH17O14917 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDH17O14917 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH17O14917 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH17O14917 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.04■□□□□ 0.32
PCDH17O14917 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH17O14917 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
PCDH17O14917 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH17O14917 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
PCDH17O14917 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH17O14917 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 HTR7P1-202ENST00000624664 4411 ntBASIC17.03■□□□□ 0.32
PCDH17O14917 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PCDH17O14917 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDH17O14917 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH17O14917 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.03■□□□□ 0.32
PCDH17O14917 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH17O14917 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
PCDH17O14917 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 RN7SL606P-201ENST00000472779 293 ntBASIC17.03■□□□□ 0.32
PCDH17O14917 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH17O14917 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
PCDH17O14917 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
PCDH17O14917 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH17O14917 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH17O14917 SDHAP2-201ENST00000455183 2001 ntBASIC17.03■□□□□ 0.32
PCDH17O14917 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH17O14917 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PCDH17O14917 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
PCDH17O14917 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PCDH17O14917 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH17O14917 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH17O14917 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH17O14917 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH17O14917 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH17O14917 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDH17O14917 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH17O14917 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH17O14917 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH17O14917 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PCDH17O14917 SLC25A6P5-201ENST00000435663 894 ntBASIC17.02■□□□□ 0.32
PCDH17O14917 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH17O14917 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH17O14917 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDH17O14917 AL592071.1-201ENST00000611956 408 ntBASIC17.02■□□□□ 0.32
PCDH17O14917 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH17O14917 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH17O14917 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDH17O14917 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH17O14917 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH17O14917 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDH17O14917 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDH17O14917 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDH17O14917 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH17O14917 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDH17O14917 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
PCDH17O14917 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH17O14917 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.31
PCDH17O14917 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.02■□□□□ 0.31
PCDH17O14917 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH17O14917 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDH17O14917 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH17O14917 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH17O14917 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH17O14917 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH17O14917 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDH17O14917 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH17O14917 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms