Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.48■□□□□ 0.39
TAF4O00268 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.48■□□□□ 0.39
TAF4O00268 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TAF4O00268 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.48■□□□□ 0.39
TAF4O00268 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TAF4O00268 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TAF4O00268 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TAF4O00268 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TAF4O00268 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.47■□□□□ 0.39
TAF4O00268 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.47■□□□□ 0.39
TAF4O00268 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TAF4O00268 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.47■□□□□ 0.39
TAF4O00268 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.47■□□□□ 0.39
TAF4O00268 AL591424.1-201ENST00000442569 1213 ntBASIC17.47■□□□□ 0.39
TAF4O00268 DNAJB3-201ENST00000446806 729 ntBASIC17.47■□□□□ 0.39
TAF4O00268 FGFR3P6-201ENST00000457012 610 ntBASIC17.47■□□□□ 0.39
TAF4O00268 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TAF4O00268 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.47■□□□□ 0.39
TAF4O00268 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.47■□□□□ 0.39
TAF4O00268 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.47■□□□□ 0.39
TAF4O00268 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.47■□□□□ 0.39
TAF4O00268 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.47■□□□□ 0.39
TAF4O00268 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.47■□□□□ 0.39
TAF4O00268 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.47■□□□□ 0.39
TAF4O00268 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TAF4O00268 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.47■□□□□ 0.39
TAF4O00268 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TAF4O00268 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
TAF4O00268 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TAF4O00268 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 RFPL4AP1-201ENST00000530883 850 ntBASIC17.46■□□□□ 0.39
TAF4O00268 AC010240.3-201ENST00000607688 395 ntBASIC17.46■□□□□ 0.39
TAF4O00268 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TAF4O00268 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.46■□□□□ 0.39
TAF4O00268 PRORSD1P-202ENST00000563365 2154 ntBASIC17.46■□□□□ 0.39
TAF4O00268 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TAF4O00268 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TAF4O00268 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.46■□□□□ 0.38
TAF4O00268 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TAF4O00268 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TAF4O00268 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.45■□□□□ 0.38
TAF4O00268 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TAF4O00268 PKD1P1-201ENST00000458669 6805 ntBASIC17.45■□□□□ 0.38
TAF4O00268 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TAF4O00268 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TAF4O00268 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.45■□□□□ 0.38
TAF4O00268 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TAF4O00268 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.45■□□□□ 0.38
TAF4O00268 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TAF4O00268 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.45■□□□□ 0.38
TAF4O00268 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.45■□□□□ 0.38
TAF4O00268 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TAF4O00268 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.45■□□□□ 0.38
TAF4O00268 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.45■□□□□ 0.38
TAF4O00268 COX20P2-201ENST00000452636 358 ntBASIC17.45■□□□□ 0.38
TAF4O00268 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms