Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01549A6NIU2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC12.7□□□□□ -0.38
LINC01549A6NIU2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 MARS-234ENST00000630571 216 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 MARS-235ENST00000630803 183 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01549A6NIU2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 HYMAI-201ENST00000635591 3347 ntBASIC12.69□□□□□ -0.38
LINC01549A6NIU2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 AC103702.1-201ENST00000548801 2630 ntBASIC12.69□□□□□ -0.38
LINC01549A6NIU2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 PCDHB19P-201ENST00000570871 2371 ntBASIC12.69□□□□□ -0.38
LINC01549A6NIU2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 AC091874.3-201ENST00000512672 1195 ntBASIC12.69□□□□□ -0.38
LINC01549A6NIU2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 AC008687.5-201ENST00000593746 558 ntBASIC12.69□□□□□ -0.38
LINC01549A6NIU2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 AL445675.2-201ENST00000620291 557 ntBASIC12.69□□□□□ -0.38
LINC01549A6NIU2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 KRT8P7-201ENST00000533003 1432 ntBASIC12.69□□□□□ -0.38
LINC01549A6NIU2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 SDHAP2-201ENST00000455183 2001 ntBASIC12.69□□□□□ -0.38
LINC01549A6NIU2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01549A6NIU2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01549A6NIU2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LINC01549A6NIU2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC01549A6NIU2 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01549A6NIU2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms