Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 AL591684.3-201ENST00000605187 298 ntBASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN16Q9Y5I7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 BX276092.7-203ENST00000637198 1536 ntBASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 AC018470.1-201ENST00000624790 3129 ntBASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 AC005104.2-201ENST00000427818 678 ntBASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 AC132008.2-207ENST00000454517 770 ntBASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 REXO1L6P-202ENST00000619970 1078 ntBASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 AD001527.2-201ENST00000622994 785 ntBASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 AC067852.2-201ENST00000590513 2313 ntBASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLDN16Q9Y5I7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 AP001269.4-201ENST00000609611 512 ntBASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 AL691432.3-201ENST00000621860 400 ntBASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 AP000867.4-201ENST00000641616 219 ntBASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 SIRPAP1-201ENST00000448467 1770 ntBASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN16Q9Y5I7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms