Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 AL354751.1-201ENST00000412768 1863 ntBASIC17.93■□□□□ 0.46
MBD1Q9UIS9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 AC008735.5-201ENST00000623544 497 ntBASIC17.93■□□□□ 0.46
MBD1Q9UIS9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 UPF3AP3-201ENST00000420996 769 ntBASIC17.92■□□□□ 0.46
MBD1Q9UIS9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 AC112698.1-201ENST00000510299 916 ntBASIC17.92■□□□□ 0.46
MBD1Q9UIS9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 AC010327.4-202ENST00000591484 748 ntBASIC17.92■□□□□ 0.46
MBD1Q9UIS9 MTDHP4-201ENST00000600287 670 ntBASIC17.92■□□□□ 0.46
MBD1Q9UIS9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 AL139288.1-201ENST00000623748 933 ntBASIC17.92■□□□□ 0.46
MBD1Q9UIS9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD1Q9UIS9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 AP002414.3-201ENST00000589352 1468 ntBASIC17.91■□□□□ 0.46
MBD1Q9UIS9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 AL591424.1-201ENST00000442569 1213 ntBASIC17.91■□□□□ 0.46
MBD1Q9UIS9 KRT18P3-201ENST00000451602 1288 ntBASIC17.91■□□□□ 0.46
MBD1Q9UIS9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD1Q9UIS9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD1Q9UIS9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD1Q9UIS9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms