Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBQLN2Q9UHD9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 C2orf69P4-201ENST00000565394 541 ntBASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBQLN2Q9UHD9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBQLN2Q9UHD9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN2Q9UHD9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.09■□□□□ 0.01
UBQLN2Q9UHD9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN2Q9UHD9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN2Q9UHD9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.09■□□□□ 0.01
UBQLN2Q9UHD9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN2Q9UHD9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
UBQLN2Q9UHD9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
UBQLN2Q9UHD9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
UBQLN2Q9UHD9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.09■□□□□ 0.01
UBQLN2Q9UHD9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.09■□□□□ 0.01
UBQLN2Q9UHD9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.09■□□□□ 0.01
UBQLN2Q9UHD9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms