Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RTN4Q9NQC3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 AP006587.1-201ENST00000534129 1502 ntBASIC21.09■□□□□ 0.97
RTN4Q9NQC3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 YBX1P10-201ENST00000444752 975 ntBASIC21.09■□□□□ 0.97
RTN4Q9NQC3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 BID-213ENST00000615414 2236 ntTSL 5 BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4Q9NQC3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 AC091874.3-201ENST00000512672 1195 ntBASIC21.08■□□□□ 0.97
RTN4Q9NQC3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 RN7SL602P-201ENST00000578326 324 ntBASIC21.08■□□□□ 0.97
RTN4Q9NQC3 AC092118.2-201ENST00000613495 667 ntBASIC21.08■□□□□ 0.97
RTN4Q9NQC3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.08■□□□□ 0.97
RTN4Q9NQC3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RTN4Q9NQC3 AC138028.4-201ENST00000564984 1845 ntBASIC21.08■□□□□ 0.96
RTN4Q9NQC3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC21.08■□□□□ 0.96
RTN4Q9NQC3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
RTN4Q9NQC3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RTN4Q9NQC3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.08■□□□□ 0.96
RTN4Q9NQC3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4Q9NQC3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms