Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 BX276092.7-203ENST00000637198 1536 ntBASIC21.03■□□□□ 0.96
RNF41Q9H4P4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF41Q9H4P4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 AC010460.3-201ENST00000511359 1579 ntBASIC21.02■□□□□ 0.96
RNF41Q9H4P4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 COX5BP2-201ENST00000392354 334 ntBASIC21.02■□□□□ 0.96
RNF41Q9H4P4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 NUS1P2-201ENST00000417358 873 ntBASIC21.02■□□□□ 0.96
RNF41Q9H4P4 TSPY19P-201ENST00000418461 509 ntBASIC21.02■□□□□ 0.96
RNF41Q9H4P4 TSPY18P-201ENST00000441642 509 ntBASIC21.02■□□□□ 0.96
RNF41Q9H4P4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF41Q9H4P4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.02■□□□□ 0.95
RNF41Q9H4P4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
RNF41Q9H4P4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF41Q9H4P4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF41Q9H4P4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 RCN1P2-201ENST00000398357 915 ntBASIC21.01■□□□□ 0.95
RNF41Q9H4P4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 AC122714.2-201ENST00000502787 707 ntBASIC21.01■□□□□ 0.95
RNF41Q9H4P4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 AC012313.10-201ENST00000623509 926 ntBASIC21.01■□□□□ 0.95
RNF41Q9H4P4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF41Q9H4P4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
RNF41Q9H4P4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF41Q9H4P4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 INTS4P1-201ENST00000438455 1935 ntBASIC21■□□□□ 0.95
RNF41Q9H4P4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF41Q9H4P4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21■□□□□ 0.95
RNF41Q9H4P4 DUSP5P1-201ENST00000441325 1139 ntBASIC21■□□□□ 0.95
RNF41Q9H4P4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms