Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CITED4Q96RK1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CITED4Q96RK1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CITED4Q96RK1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CITED4Q96RK1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CITED4Q96RK1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CITED4Q96RK1 AL512625.2-201ENST00000417533 625 ntBASIC15.33■□□□□ 0.04
CITED4Q96RK1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 RPS2P52-201ENST00000469610 820 ntBASIC15.33■□□□□ 0.04
CITED4Q96RK1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CITED4Q96RK1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CITED4Q96RK1 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CITED4Q96RK1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CITED4Q96RK1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CITED4Q96RK1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CITED4Q96RK1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CITED4Q96RK1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CITED4Q96RK1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 DUSP5P2-201ENST00000426873 1033 ntBASIC15.32■□□□□ 0.04
CITED4Q96RK1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CITED4Q96RK1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CITED4Q96RK1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CITED4Q96RK1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.31■□□□□ 0.04
CITED4Q96RK1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CITED4Q96RK1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CITED4Q96RK1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.31■□□□□ 0.04
CITED4Q96RK1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CITED4Q96RK1 AC026691.1-201ENST00000602502 2017 ntBASIC15.31■□□□□ 0.04
CITED4Q96RK1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
CITED4Q96RK1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CITED4Q96RK1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CITED4Q96RK1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CITED4Q96RK1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CITED4Q96RK1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CITED4Q96RK1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CITED4Q96RK1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CITED4Q96RK1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CITED4Q96RK1 AC105917.1-201ENST00000506637 2539 ntBASIC15.31■□□□□ 0.04
CITED4Q96RK1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CITED4Q96RK1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CITED4Q96RK1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CITED4Q96RK1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.31■□□□□ 0.04
CITED4Q96RK1 GCSHP5-201ENST00000443090 522 ntBASIC15.31■□□□□ 0.04
CITED4Q96RK1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.31■□□□□ 0.04
CITED4Q96RK1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms