Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 REXO1L11P-201ENST00000620964 1927 ntBASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSPG4P5Q96PW8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CSPG4P5Q96PW8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.39■□□□□ 0.54
CSPG4P5Q96PW8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CSPG4P5Q96PW8 LINC00304-203ENST00000565008 1864 ntBASIC18.39■□□□□ 0.54
CSPG4P5Q96PW8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 PCED1CP-201ENST00000419887 785 ntBASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 AL845331.1-201ENST00000424978 1190 ntBASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 AC090616.6-201ENST00000582640 721 ntBASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 AC124864.1-201ENST00000623408 392 ntBASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.39■□□□□ 0.53
CSPG4P5Q96PW8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 AC133963.1-201ENST00000504166 1679 ntBASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 KRT18P35-201ENST00000510488 1269 ntBASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 AL353801.3-201ENST00000609898 542 ntBASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 IGHV3-41-201ENST00000613121 348 ntBASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG4P5Q96PW8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 AC096633.1-201ENST00000422446 749 ntBASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 BX276092.5-203ENST00000456199 560 ntBASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.37■□□□□ 0.53
CSPG4P5Q96PW8 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms