Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 KRT18P21-201ENST00000515767 1272 ntBASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 RNF126P1-202ENST00000569893 925 ntBASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 FZD10-202ENST00000539839 3282 ntBASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.66■□□□□ 0.26
MS4A4EQ96PG1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 AL355312.1-201ENST00000407115 2176 ntBASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A4EQ96PG1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
MS4A4EQ96PG1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
MS4A4EQ96PG1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.64■□□□□ 0.26
MS4A4EQ96PG1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
MS4A4EQ96PG1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MS4A4EQ96PG1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms