Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 AC012615.1-201ENST00000565797 1299 ntBASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 AC036111.1-201ENST00000533973 1582 ntBASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 GPAT2P1-201ENST00000444924 1672 ntBASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPGRIP1Q96KN7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 AL157888.1-201ENST00000631930 593 ntBASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
RPGRIP1Q96KN7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 AL136038.4-201ENST00000603606 1261 ntBASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 AL121912.1-201ENST00000603683 238 ntBASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 AC138894.3-201ENST00000603787 634 ntBASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 AC068587.9-201ENST00000641814 219 ntBASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 FLJ13224-201ENST00000313737 1514 ntBASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPGRIP1Q96KN7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms