Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SPG11Q96JI7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.08■□□□□ 0
SPG11Q96JI7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SPG11Q96JI7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.07■□□□□ 0
SPG11Q96JI7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.07■□□□□ 0
SPG11Q96JI7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SPG11Q96JI7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.07■□□□□ 0
SPG11Q96JI7 AC005225.4-201ENST00000557330 545 ntBASIC15.07■□□□□ 0
SPG11Q96JI7 OR7E47P-204ENST00000575924 449 ntBASIC15.07■□□□□ 0
SPG11Q96JI7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.07■□□□□ 0
SPG11Q96JI7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.07■□□□□ 0
SPG11Q96JI7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.07■□□□□ 0
SPG11Q96JI7 AC005593.1-201ENST00000624894 515 ntBASIC15.07■□□□□ 0
SPG11Q96JI7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.07■□□□□ 0
SPG11Q96JI7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.07■□□□□ 0
SPG11Q96JI7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC15.07■□□□□ 0
SPG11Q96JI7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.07■□□□□ 0
SPG11Q96JI7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.07■□□□□ 0
SPG11Q96JI7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.07■□□□□ 0
SPG11Q96JI7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.07■□□□□ 0
SPG11Q96JI7 LINC01126-201ENST00000623515 1646 ntBASIC15.07■□□□□ 0
SPG11Q96JI7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.07■□□□□ 0
SPG11Q96JI7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.07■□□□□ 0
SPG11Q96JI7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.07■□□□□ 0
SPG11Q96JI7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 ELK2BP-201ENST00000415014 1224 ntBASIC15.07■□□□□ 0
SPG11Q96JI7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.07■□□□□ 0
SPG11Q96JI7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 AP000344.2-201ENST00000512987 629 ntBASIC15.07■□□□□ 0
SPG11Q96JI7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.07■□□□□ 0
SPG11Q96JI7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.07■□□□□ 0
SPG11Q96JI7 AL589182.2-201ENST00000619332 1049 ntBASIC15.07■□□□□ 0
SPG11Q96JI7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.07■□□□□ 0
SPG11Q96JI7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SPG11Q96JI7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPG11Q96JI7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.07■□□□□ 0
SPG11Q96JI7 AL161938.1-201ENST00000569833 2180 ntBASIC15.07■□□□□ 0
SPG11Q96JI7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.06■□□□□ 0
SPG11Q96JI7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
SPG11Q96JI7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPG11Q96JI7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.06■□□□□ 0
SPG11Q96JI7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.06■□□□□ 0
SPG11Q96JI7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.06■□□□□ 0
SPG11Q96JI7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.06■□□□□ 0
SPG11Q96JI7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SPG11Q96JI7 AC093214.1-201ENST00000511688 1107 ntBASIC15.06■□□□□ 0
SPG11Q96JI7 KRT19P2-202ENST00000557173 1012 ntBASIC15.06■□□□□ 0
SPG11Q96JI7 AL008721.1-201ENST00000609964 604 ntBASIC15.06■□□□□ 0
SPG11Q96JI7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPG11Q96JI7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
SPG11Q96JI7 AC009102.3-201ENST00000623118 1491 ntBASIC15.06■□□□□ 0
SPG11Q96JI7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.06■□□□□ 0
SPG11Q96JI7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPG11Q96JI7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.06■□□□□ 0
SPG11Q96JI7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
SPG11Q96JI7 MYLKP1-201ENST00000509077 1580 ntBASIC15.06■□□□□ 0
SPG11Q96JI7 NCF1C-201ENST00000438382 1427 ntBASIC15.06■□□□□ 0
SPG11Q96JI7 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.06■□□□□ 0
SPG11Q96JI7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPG11Q96JI7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.06■□□□□ 0
SPG11Q96JI7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.06■□□□□ 0
SPG11Q96JI7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.06■□□□□ 0
SPG11Q96JI7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SPG11Q96JI7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SPG11Q96JI7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPG11Q96JI7 AC148477.5-201ENST00000625164 1645 ntBASIC15.06■□□□□ 0
SPG11Q96JI7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SPG11Q96JI7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPG11Q96JI7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SPG11Q96JI7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.06■□□□□ 0
SPG11Q96JI7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SPG11Q96JI7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.05■□□□□ 0
SPG11Q96JI7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.05■□□□□ 0
SPG11Q96JI7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.05■□□□□ 0
SPG11Q96JI7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.05■□□□□ 0
SPG11Q96JI7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SPG11Q96JI7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.05■□□□□ 0
SPG11Q96JI7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.05■□□□□ 0
SPG11Q96JI7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.05■□□□□ 0
SPG11Q96JI7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.05■□□□□ 0
SPG11Q96JI7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms