Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SLC44A1Q8WWI5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SLC44A1Q8WWI5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SLC44A1Q8WWI5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SLC44A1Q8WWI5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 AC008550.1-201ENST00000511500 884 ntBASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 KRT8P47-201ENST00000604727 1398 ntBASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC44A1Q8WWI5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 NEK4P2-201ENST00000580004 1012 ntBASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC44A1Q8WWI5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 AL596275.1-201ENST00000423464 877 ntBASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 AL157888.1-201ENST00000631930 593 ntBASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 OR6D1P-202ENST00000641007 5290 ntBASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC44A1Q8WWI5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms