Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 AC010460.3-201ENST00000511359 1579 ntBASIC19.17■□□□□ 0.66
BEST2Q8NFU1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BEST2Q8NFU1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 KRT18P55-202ENST00000578578 1546 ntBASIC19.16■□□□□ 0.66
BEST2Q8NFU1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 AC009078.2-202ENST00000463353 338 ntBASIC19.16■□□□□ 0.66
BEST2Q8NFU1 AC106795.1-205ENST00000512851 1056 ntBASIC19.16■□□□□ 0.66
BEST2Q8NFU1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST2Q8NFU1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 AC122714.2-201ENST00000502787 707 ntBASIC19.15■□□□□ 0.66
BEST2Q8NFU1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 AL121912.1-201ENST00000603683 238 ntBASIC19.15■□□□□ 0.66
BEST2Q8NFU1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 AC135050.7-201ENST00000624508 2218 ntBASIC19.15■□□□□ 0.66
BEST2Q8NFU1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
BEST2Q8NFU1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BEST2Q8NFU1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BEST2Q8NFU1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BEST2Q8NFU1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
BEST2Q8NFU1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BEST2Q8NFU1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BEST2Q8NFU1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
BEST2Q8NFU1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
BEST2Q8NFU1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 AL354751.1-201ENST00000412768 1863 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms