Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 AL161938.1-201ENST00000569833 2180 ntBASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 AL162741.1-201ENST00000565563 1558 ntBASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 MEX3B-202ENST00000558133 4333 ntBASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 AC092028.1-203ENST00000608262 953 ntBASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 AC108860.2-201ENST00000562760 2183 ntBASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC9.8□□□□□ -0.84
SPTSSBQ8NFR3 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms