Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NME8Q8N427 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.62■□□□□ 0.73
NME8Q8N427 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NME8Q8N427 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NME8Q8N427 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NME8Q8N427 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NME8Q8N427 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.62■□□□□ 0.73
NME8Q8N427 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.62■□□□□ 0.73
NME8Q8N427 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.62■□□□□ 0.73
NME8Q8N427 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.62■□□□□ 0.73
NME8Q8N427 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.62■□□□□ 0.73
NME8Q8N427 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.62■□□□□ 0.73
NME8Q8N427 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.62■□□□□ 0.73
NME8Q8N427 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.62■□□□□ 0.73
NME8Q8N427 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NME8Q8N427 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.62■□□□□ 0.73
NME8Q8N427 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.62■□□□□ 0.73
NME8Q8N427 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NME8Q8N427 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NME8Q8N427 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NME8Q8N427 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NME8Q8N427 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
NME8Q8N427 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NME8Q8N427 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NME8Q8N427 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NME8Q8N427 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NME8Q8N427 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
NME8Q8N427 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NME8Q8N427 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.61■□□□□ 0.73
NME8Q8N427 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.61■□□□□ 0.73
NME8Q8N427 AC103564.2-201ENST00000432853 1299 ntBASIC19.61■□□□□ 0.73
NME8Q8N427 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NME8Q8N427 RPL13AP23-201ENST00000480739 586 ntBASIC19.61■□□□□ 0.73
NME8Q8N427 SLC25A1P1-201ENST00000528351 927 ntBASIC19.61■□□□□ 0.73
NME8Q8N427 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.61■□□□□ 0.73
NME8Q8N427 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
NME8Q8N427 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.61■□□□□ 0.73
NME8Q8N427 NKAPP1-205ENST00000585790 367 ntBASIC19.61■□□□□ 0.73
NME8Q8N427 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NME8Q8N427 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
NME8Q8N427 AC004408.2-201ENST00000623613 2777 ntBASIC19.61■□□□□ 0.73
NME8Q8N427 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.61■□□□□ 0.73
NME8Q8N427 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NME8Q8N427 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NME8Q8N427 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NME8Q8N427 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NME8Q8N427 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.61■□□□□ 0.73
NME8Q8N427 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NME8Q8N427 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.61■□□□□ 0.73
NME8Q8N427 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NME8Q8N427 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.61■□□□□ 0.73
NME8Q8N427 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.61■□□□□ 0.73
NME8Q8N427 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.61■□□□□ 0.73
NME8Q8N427 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NME8Q8N427 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.61■□□□□ 0.73
NME8Q8N427 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NME8Q8N427 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NME8Q8N427 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NME8Q8N427 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NME8Q8N427 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NME8Q8N427 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NME8Q8N427 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NME8Q8N427 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NME8Q8N427 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NME8Q8N427 RPS2P1-201ENST00000434010 821 ntBASIC19.6■□□□□ 0.73
NME8Q8N427 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.6■□□□□ 0.73
NME8Q8N427 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NME8Q8N427 KRT18P58-201ENST00000527480 1120 ntBASIC19.6■□□□□ 0.73
NME8Q8N427 OR7E14P-202ENST00000530490 1290 ntBASIC19.6■□□□□ 0.73
NME8Q8N427 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.6■□□□□ 0.73
NME8Q8N427 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.6■□□□□ 0.73
NME8Q8N427 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.6■□□□□ 0.73
NME8Q8N427 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.6■□□□□ 0.73
NME8Q8N427 AD001527.2-201ENST00000622994 785 ntBASIC19.6■□□□□ 0.73
NME8Q8N427 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NME8Q8N427 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NME8Q8N427 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NME8Q8N427 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NME8Q8N427 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NME8Q8N427 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
NME8Q8N427 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.6■□□□□ 0.73
NME8Q8N427 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NME8Q8N427 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
NME8Q8N427 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NME8Q8N427 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NME8Q8N427 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NME8Q8N427 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NME8Q8N427 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NME8Q8N427 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NME8Q8N427 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NME8Q8N427 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NME8Q8N427 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
NME8Q8N427 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NME8Q8N427 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NME8Q8N427 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.59■□□□□ 0.73
NME8Q8N427 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.59■□□□□ 0.73
NME8Q8N427 PMPCAP1-201ENST00000508114 1576 ntBASIC19.59■□□□□ 0.73
NME8Q8N427 AC010460.3-201ENST00000511359 1579 ntBASIC19.59■□□□□ 0.73
NME8Q8N427 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NME8Q8N427 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms