Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 AL354751.1-201ENST00000412768 1863 ntBASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 AC097374.2-201ENST00000618617 1306 ntBASIC15.16■□□□□ 0.02
RAI1Q7Z5J4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 AC009947.1-201ENST00000444350 727 ntBASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 BICD1-207ENST00000551848 1962 ntBASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 ALG1L5P-201ENST00000482043 771 ntBASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 MIR1199-201ENST00000621445 119 ntBASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 AP000867.4-201ENST00000641616 219 ntBASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAI1Q7Z5J4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
RAI1Q7Z5J4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 NCF1C-201ENST00000438382 1427 ntBASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 MIR940-201ENST00000401276 94 ntBASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms