Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DCLRE1AQ6PJP8 PMPCAP1-201ENST00000508114 1576 ntBASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 AC009113.1-201ENST00000570267 2443 ntBASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 AC139887.3-201ENST00000568585 713 ntBASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DCLRE1AQ6PJP8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.02■□□□□ 0.63
DCLRE1AQ6PJP8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.02■□□□□ 0.63
DCLRE1AQ6PJP8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 AL049840.3-201ENST00000602669 611 ntBASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 AC116407.2-201ENST00000613639 860 ntBASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 AC104581.1-202ENST00000635932 2618 ntBASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.01■□□□□ 0.63
DCLRE1AQ6PJP8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 MIR7706-201ENST00000613747 67 ntBASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 AC243591.1-201ENST00000452967 1364 ntBASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
DCLRE1AQ6PJP8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms