Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
MRPL54Q6P161 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL54Q6P161 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL54Q6P161 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL54Q6P161 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL54Q6P161 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.52□□□□□ -0.25
MRPL54Q6P161 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL54Q6P161 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL54Q6P161 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.52□□□□□ -0.25
MRPL54Q6P161 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL54Q6P161 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.52□□□□□ -0.25
MRPL54Q6P161 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL54Q6P161 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL54Q6P161 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 RCC2P3-201ENST00000418112 1537 ntBASIC13.51□□□□□ -0.25
MRPL54Q6P161 KRT8P3-201ENST00000519669 1449 ntBASIC13.51□□□□□ -0.25
MRPL54Q6P161 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 AC103702.1-201ENST00000548801 2630 ntBASIC13.51□□□□□ -0.25
MRPL54Q6P161 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MRPL54Q6P161 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
MRPL54Q6P161 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 AC132872.4-202ENST00000622924 2756 ntBASIC13.5□□□□□ -0.25
MRPL54Q6P161 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms