Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC00982-205ENST00000420957 435 ntBASIC22.32■■□□□ 1.16
RC3H1Q5TC82 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RC3H1Q5TC82 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC22.32■■□□□ 1.16
RC3H1Q5TC82 HLA-J-203ENST00000494367 1087 ntBASIC22.32■■□□□ 1.16
RC3H1Q5TC82 AC004835.2-201ENST00000603762 682 ntBASIC22.32■■□□□ 1.16
RC3H1Q5TC82 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RC3H1Q5TC82 AC105339.1-204ENST00000636249 355 ntBASIC22.32■■□□□ 1.16
RC3H1Q5TC82 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.32■■□□□ 1.16
RC3H1Q5TC82 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RC3H1Q5TC82 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 REM2-202ENST00000536884 1331 ntTSL 2 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 GOLGA6L17P-202ENST00000614358 1398 ntBASIC22.31■■□□□ 1.16
RC3H1Q5TC82 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 RPL28-205ENST00000558131 444 ntTSL 5 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 AC073592.3-201ENST00000625118 1834 ntBASIC22.31■■□□□ 1.16
RC3H1Q5TC82 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
RC3H1Q5TC82 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 NEK7-201ENST00000367383 586 ntTSL 2 BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 AC004461.1-201ENST00000412461 403 ntBASIC22.3■■□□□ 1.16
RC3H1Q5TC82 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 AL121761.2-201ENST00000598007 1648 ntBASIC22.3■■□□□ 1.16
RC3H1Q5TC82 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC22.3■■□□□ 1.16
RC3H1Q5TC82 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 BCRP1-201ENST00000444246 691 ntBASIC22.29■■□□□ 1.16
RC3H1Q5TC82 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 TK1-204ENST00000590430 683 ntTSL 3 BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 BX276092.7-203ENST00000637198 1536 ntBASIC22.29■■□□□ 1.16
RC3H1Q5TC82 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RC3H1Q5TC82 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC22.28■■□□□ 1.16
RC3H1Q5TC82 IGHV3-52-201ENST00000519770 353 ntBASIC22.28■■□□□ 1.16
RC3H1Q5TC82 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms