Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SUMO3P55854 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SUMO3P55854 COX5BP2-201ENST00000392354 334 ntBASIC16.16■□□□□ 0.18
SUMO3P55854 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.16■□□□□ 0.18
SUMO3P55854 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SUMO3P55854 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.16■□□□□ 0.18
SUMO3P55854 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SUMO3P55854 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.16■□□□□ 0.18
SUMO3P55854 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.16■□□□□ 0.18
SUMO3P55854 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.16■□□□□ 0.18
SUMO3P55854 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SUMO3P55854 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SUMO3P55854 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.16■□□□□ 0.18
SUMO3P55854 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SUMO3P55854 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SUMO3P55854 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SUMO3P55854 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SUMO3P55854 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.16■□□□□ 0.18
SUMO3P55854 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SUMO3P55854 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SUMO3P55854 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SUMO3P55854 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.16■□□□□ 0.18
SUMO3P55854 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.16■□□□□ 0.18
SUMO3P55854 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SUMO3P55854 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SUMO3P55854 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SUMO3P55854 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.16■□□□□ 0.18
SUMO3P55854 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SUMO3P55854 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SUMO3P55854 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SUMO3P55854 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.15■□□□□ 0.18
SUMO3P55854 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SUMO3P55854 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.15■□□□□ 0.18
SUMO3P55854 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SUMO3P55854 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 AC068880.1-201ENST00000507289 2297 ntBASIC16.15■□□□□ 0.18
SUMO3P55854 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SUMO3P55854 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.15■□□□□ 0.18
SUMO3P55854 AC005104.2-201ENST00000427818 678 ntBASIC16.15■□□□□ 0.18
SUMO3P55854 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
SUMO3P55854 KRT17P6-201ENST00000453795 1220 ntBASIC16.15■□□□□ 0.18
SUMO3P55854 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.15■□□□□ 0.18
SUMO3P55854 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.15■□□□□ 0.18
SUMO3P55854 AC012615.1-201ENST00000565797 1299 ntBASIC16.15■□□□□ 0.18
SUMO3P55854 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.15■□□□□ 0.18
SUMO3P55854 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.15■□□□□ 0.18
SUMO3P55854 AC092329.2-201ENST00000598402 547 ntBASIC16.15■□□□□ 0.18
SUMO3P55854 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SUMO3P55854 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SUMO3P55854 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
SUMO3P55854 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.15■□□□□ 0.18
SUMO3P55854 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SUMO3P55854 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.14■□□□□ 0.18
SUMO3P55854 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SUMO3P55854 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SUMO3P55854 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SUMO3P55854 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SUMO3P55854 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SUMO3P55854 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SUMO3P55854 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SUMO3P55854 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.14■□□□□ 0.17
SUMO3P55854 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SUMO3P55854 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SUMO3P55854 FAM220CP-201ENST00000395253 831 ntBASIC16.14■□□□□ 0.17
SUMO3P55854 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SUMO3P55854 AC007967.3-201ENST00000434308 558 ntBASIC16.14■□□□□ 0.17
SUMO3P55854 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.14■□□□□ 0.17
SUMO3P55854 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.14■□□□□ 0.17
SUMO3P55854 AC122714.2-201ENST00000502787 707 ntBASIC16.14■□□□□ 0.17
SUMO3P55854 AC104819.1-201ENST00000504587 486 ntBASIC16.14■□□□□ 0.17
SUMO3P55854 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SUMO3P55854 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.14■□□□□ 0.17
SUMO3P55854 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.14■□□□□ 0.17
SUMO3P55854 AC093458.2-201ENST00000623150 629 ntBASIC16.14■□□□□ 0.17
SUMO3P55854 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
SUMO3P55854 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SUMO3P55854 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.14■□□□□ 0.17
SUMO3P55854 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SUMO3P55854 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SUMO3P55854 AC134043.2-201ENST00000624206 2238 ntBASIC16.14■□□□□ 0.17
SUMO3P55854 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SUMO3P55854 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SUMO3P55854 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms