Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GTF2A1P52655 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GTF2A1P52655 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
GTF2A1P52655 AC138035.3-201ENST00000622706 2791 ntBASIC17.55■□□□□ 0.4
GTF2A1P52655 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GTF2A1P52655 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.55■□□□□ 0.4
GTF2A1P52655 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GTF2A1P52655 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.55■□□□□ 0.4
GTF2A1P52655 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.55■□□□□ 0.4
GTF2A1P52655 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.55■□□□□ 0.4
GTF2A1P52655 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GTF2A1P52655 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.54■□□□□ 0.4
GTF2A1P52655 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
GTF2A1P52655 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.54■□□□□ 0.4
GTF2A1P52655 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.54■□□□□ 0.4
GTF2A1P52655 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 FLJ13224-201ENST00000313737 1514 ntBASIC17.54■□□□□ 0.4
GTF2A1P52655 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
GTF2A1P52655 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
GTF2A1P52655 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
GTF2A1P52655 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
GTF2A1P52655 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
GTF2A1P52655 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.54■□□□□ 0.4
GTF2A1P52655 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.54■□□□□ 0.4
GTF2A1P52655 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
GTF2A1P52655 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
GTF2A1P52655 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.54■□□□□ 0.4
GTF2A1P52655 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
GTF2A1P52655 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 CYP2T1P-202ENST00000641596 2535 ntBASIC17.54■□□□□ 0.4
GTF2A1P52655 AC087633.2-202ENST00000565166 1439 ntBASIC17.54■□□□□ 0.4
GTF2A1P52655 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
GTF2A1P52655 PTBP1P-201ENST00000554374 1601 ntBASIC17.54■□□□□ 0.4
GTF2A1P52655 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GTF2A1P52655 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GTF2A1P52655 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.53■□□□□ 0.4
GTF2A1P52655 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GTF2A1P52655 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GTF2A1P52655 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GTF2A1P52655 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.53■□□□□ 0.4
GTF2A1P52655 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.53■□□□□ 0.4
GTF2A1P52655 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
GTF2A1P52655 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.53■□□□□ 0.4
GTF2A1P52655 TERF1P2-201ENST00000583350 1212 ntBASIC17.53■□□□□ 0.4
GTF2A1P52655 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
GTF2A1P52655 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 AC004854.2-201ENST00000608450 1441 ntBASIC17.53■□□□□ 0.4
GTF2A1P52655 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.53■□□□□ 0.4
GTF2A1P52655 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GTF2A1P52655 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GTF2A1P52655 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GTF2A1P52655 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
GTF2A1P52655 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.52■□□□□ 0.4
GTF2A1P52655 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.52■□□□□ 0.4
GTF2A1P52655 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GTF2A1P52655 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GTF2A1P52655 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GTF2A1P52655 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GTF2A1P52655 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GTF2A1P52655 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.52■□□□□ 0.4
GTF2A1P52655 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GTF2A1P52655 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GTF2A1P52655 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.52■□□□□ 0.4
GTF2A1P52655 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
GTF2A1P52655 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
GTF2A1P52655 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
GTF2A1P52655 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
GTF2A1P52655 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms