Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.52e-6■■□□□ 14.1
MATR3P43243 HDHD2-205ENST00000588183 2224 ntTSL 1 (best)18.16■□□□□ 0.52e-6■■□□□ 14.1
MATR3P43243 HDHD2-202ENST00000586546 568 ntTSL 417.36■□□□□ 0.372e-6■■□□□ 14.1
MATR3P43243 HDHD2-204ENST00000587841 788 ntTSL 317.36■□□□□ 0.372e-6■■□□□ 14.1
MATR3P43243 AC012254.2-201ENST00000602459 1443 ntAPPRIS ALT2 TSL 515.88■□□□□ 0.132e-6■■□□□ 14.1
MATR3P43243 HDHD2-209ENST00000590815 809 ntTSL 313.13□□□□□ -0.312e-6■■□□□ 14.1
MATR3P43243 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.35□□□□□ -1.232e-6■■□□□ 14.1
MATR3P43243 AC012254.2-202ENST00000602926 291 ntAPPRIS ALT2 TSL 26.99□□□□□ -1.292e-6■■□□□ 14.1
MATR3P43243 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.447e-7■■□□□ 14.1
MATR3P43243 SLC39A14-209ENST00000520644 377 ntTSL 521.79■■□□□ 1.087e-7■■□□□ 14.1
MATR3P43243 SLC39A14-212ENST00000524285 570 ntTSL 419.27■□□□□ 0.687e-7■■□□□ 14.1
MATR3P43243 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.097e-7■■□□□ 14.1
MATR3P43243 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.167e-7■■□□□ 14.1
MATR3P43243 SLC39A14-203ENST00000359741 4641 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.267e-7■■□□□ 14.1
MATR3P43243 ATP6V0A1-220ENST00000588901 589 ntTSL 219.6■□□□□ 0.732e-7■■□□□ 14.1
MATR3P43243 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.17■□□□□ 0.342e-7■■□□□ 14.1
MATR3P43243 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)16.4■□□□□ 0.225e-7■■□□□ 14.1
MATR3P43243 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.16■□□□□ 0.182e-7■■□□□ 14.1
MATR3P43243 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.035e-7■■□□□ 14.1
MATR3P43243 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC15.24■□□□□ 0.035e-7■■□□□ 14.1
MATR3P43243 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.14■□□□□ 0.012e-7■■□□□ 14.1
MATR3P43243 ACVR1-206ENST00000424669 550 ntTSL 414.84□□□□□ -0.035e-7■■□□□ 14.1
MATR3P43243 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC13.33□□□□□ -0.285e-7■■□□□ 14.1
MATR3P43243 ATP6V0A1-205ENST00000544137 3047 ntTSL 1 (best) BASIC12.84□□□□□ -0.352e-7■■□□□ 14.1
MATR3P43243 ACVR1-210ENST00000539637 564 ntTSL 411.39□□□□□ -0.595e-7■■□□□ 14.1
MATR3P43243 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.712e-7■■□□□ 14.1
MATR3P43243 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.732e-7■■□□□ 14.1
MATR3P43243 ACVR1-208ENST00000440523 534 ntTSL 39.97□□□□□ -0.815e-7■■□□□ 14.1
MATR3P43243 ATP6V0A1-212ENST00000587375 546 ntTSL 49.05□□□□□ -0.962e-7■■□□□ 14.1
MATR3P43243 ATP6V0A1-224ENST00000592324 585 ntTSL 47.44□□□□□ -1.222e-7■■□□□ 14.1
MATR3P43243 ATP6V0A1-222ENST00000589727 664 ntTSL 57.03□□□□□ -1.282e-7■■□□□ 14.1
MATR3P43243 ACVR1-205ENST00000413751 536 ntTSL 46.52□□□□□ -1.375e-7■■□□□ 14.1
MATR3P43243 TNRC6A-211ENST00000566108 454 ntTSL 314.17□□□□□ -0.147e-7■■□□□ 14.1
MATR3P43243 USP3-204ENST00000540797 5474 ntTSL 2 BASIC16.49■□□□□ 0.236e-9■■□□□ 14.1
MATR3P43243 USP3-221ENST00000561442 542 ntTSL 515.72■□□□□ 0.116e-9■■□□□ 14.1
MATR3P43243 USP3-205ENST00000557884 958 ntTSL 315.72■□□□□ 0.116e-9■■□□□ 14.1
MATR3P43243 USP3-202ENST00000380324 2333 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.336e-9■■□□□ 14.1
MATR3P43243 USP3-206ENST00000558157 2439 ntTSL 1 (best)11.91□□□□□ -0.56e-9■■□□□ 14.1
MATR3P43243 USP3-219ENST00000561326 543 ntTSL 411.26□□□□□ -0.616e-9■■□□□ 14.1
MATR3P43243 USP3-216ENST00000559873 584 ntTSL 511.05□□□□□ -0.646e-9■■□□□ 14.1
MATR3P43243 USP3-217ENST00000560070 545 ntTSL 49.42□□□□□ -0.96e-9■■□□□ 14.1
MATR3P43243 USP3-210ENST00000559192 5499 ntTSL 1 (best)8.15□□□□□ -1.116e-9■■□□□ 14.1
MATR3P43243 USP15-206ENST00000546718 559 ntTSL 215.71■□□□□ 0.119e-7■■□□□ 14.1
MATR3P43243 USP15-217ENST00000551206 1022 ntTSL 214.3□□□□□ -0.129e-7■■□□□ 14.1
MATR3P43243 USP15-204ENST00000537297 579 ntTSL 211.64□□□□□ -0.559e-7■■□□□ 14.1
MATR3P43243 USP15-208ENST00000548524 648 ntTSL 210.42□□□□□ -0.749e-7■■□□□ 14.1
MATR3P43243 NAP1L1-222ENST00000551992 1074 ntTSL 526.51■■□□□ 1.832e-7■■□□□ 14.1
MATR3P43243 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.232e-7■■□□□ 14.1
MATR3P43243 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.082e-7■■□□□ 14.1
MATR3P43243 NAP1L1-214ENST00000548273 818 ntTSL 314.07□□□□□ -0.162e-7■■□□□ 14.1
MATR3P43243 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC13.29□□□□□ -0.282e-7■■□□□ 14.1
MATR3P43243 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC13.28□□□□□ -0.282e-7■■□□□ 14.1
MATR3P43243 NAP1L1-217ENST00000549988 544 ntTSL 313.26□□□□□ -0.292e-7■■□□□ 14.1
MATR3P43243 NAP1L1-210ENST00000547773 1967 ntTSL 5 BASIC12.39□□□□□ -0.432e-7■■□□□ 14.1
MATR3P43243 NAP1L1-205ENST00000542344 1675 ntTSL 2 BASIC12.27□□□□□ -0.452e-7■■□□□ 14.1
MATR3P43243 NAP1L1-216ENST00000549596 1838 ntTSL 2 BASIC11.46□□□□□ -0.582e-7■■□□□ 14.1
MATR3P43243 NAP1L1-203ENST00000431879 2031 ntTSL 2 BASIC11.39□□□□□ -0.592e-7■■□□□ 14.1
MATR3P43243 NAP1L1-213ENST00000548044 1339 ntTSL 5 BASIC11.08□□□□□ -0.642e-7■■□□□ 14.1
MATR3P43243 NAP1L1-209ENST00000547704 760 ntTSL 510.61□□□□□ -0.712e-7■■□□□ 14.1
MATR3P43243 NAP1L1-221ENST00000551600 786 ntTSL 510.61□□□□□ -0.712e-7■■□□□ 14.1
MATR3P43243 NAP1L1-207ENST00000547479 623 ntTSL 510.5□□□□□ -0.732e-7■■□□□ 14.1
MATR3P43243 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.112e-7■■□□□ 14.1
MATR3P43243 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.15□□□□□ -1.592e-7■■□□□ 14.1
MATR3P43243 NAP1L1-218ENST00000550934 851 ntTSL 53.8□□□□□ -1.82e-7■■□□□ 14.1
MATR3P43243 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.124e-8■■□□□ 14.1
MATR3P43243 LRIF1-201ENST00000369763 3475 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.444e-8■■□□□ 14.1
MATR3P43243 DCAF6-212ENST00000491067 536 ntTSL 35.05□□□□□ -1.62e-6■■□□□ 14.1
MATR3P43243 GCLC-203ENST00000504525 1011 ntTSL 324.8■■□□□ 1.564e-8■■□□□ 14.1
MATR3P43243 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.25■□□□□ 0.514e-8■■□□□ 14.1
MATR3P43243 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.224e-8■■□□□ 14.1
MATR3P43243 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC8.57□□□□□ -1.043e-6■■□□□ 14.1
MATR3P43243 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.373e-6■■□□□ 14.1
MATR3P43243 LRRC8B-204ENST00000449440 763 ntTSL 326.86■■□□□ 1.892e-6■■□□□ 14.1
MATR3P43243 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.92e-6■■□□□ 14.1
MATR3P43243 LRRC8B-205ENST00000639264 7736 ntAPPRIS P1 TSL 57.33□□□□□ -1.242e-6■■□□□ 14.1
MATR3P43243 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.492e-6■■□□□ 14.1
MATR3P43243 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.43■■□□□ 1.662e-6■■□□□ 14.1
MATR3P43243 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.872e-6■■□□□ 14.1
MATR3P43243 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.32e-6■■□□□ 14.1
MATR3P43243 OLA1-203ENST00000392560 711 ntTSL 59.69□□□□□ -0.863e-6■■□□□ 14.1
MATR3P43243 OLA1-208ENST00000462000 656 ntTSL 26.67□□□□□ -1.343e-6■■□□□ 14.1
MATR3P43243 UGGT1-202ENST00000376723 6682 ntTSL 1 (best)18.55■□□□□ 0.569e-9■■□□□ 14.1
MATR3P43243 UGGT1-205ENST00000438277 3113 ntTSL 1 (best)14.37□□□□□ -0.119e-9■■□□□ 14.1
MATR3P43243 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.269e-9■■□□□ 14.1
MATR3P43243 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.871e-7■■□□□ 14
MATR3P43243 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.072e-6■■□□□ 14
MATR3P43243 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.32e-6■■□□□ 14
MATR3P43243 ACVR1-207ENST00000434821 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.327e-7■■□□□ 14
MATR3P43243 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.787e-7■■□□□ 14
MATR3P43243 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.14■■■□□ 2.254e-7■■□□□ 14
MATR3P43243 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.274e-7■■□□□ 14
MATR3P43243 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.45■□□□□ 0.74e-7■■□□□ 14
MATR3P43243 PI4KAP1-203ENST00000612500 1869 ntTSL 219.11■□□□□ 0.654e-7■■□□□ 14
MATR3P43243 PDP2-206ENST00000566805 558 ntTSL 419.05■□□□□ 0.644e-7■■□□□ 14
MATR3P43243 EHMT1-202ENST00000460486 818 ntTSL 518.77■□□□□ 0.66e-9■■□□□ 14
MATR3P43243 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.36■□□□□ 0.214e-7■■□□□ 14
MATR3P43243 PDP2-208ENST00000568720 917 ntTSL 316.19■□□□□ 0.184e-7■■□□□ 14
MATR3P43243 EHMT1-244ENST00000637655 100 ntTSL 515.57■□□□□ 0.086e-9■■□□□ 14
MATR3P43243 SLC1A5-206ENST00000598022 276 ntTSL 315.08■□□□□ 04e-7■■□□□ 14
MATR3P43243 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.024e-7■■□□□ 14
Retrieved 100 of 16,209 protein–RNA pairs in 83 ms