Protein–RNA interactions for Protein: P19387

POLR2C, DNA-directed RNA polymerase II subunit RPB3, humanhuman

Predicted RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2CP19387 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
POLR2CP19387 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2CP19387 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
POLR2CP19387 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2CP19387 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2CP19387 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2CP19387 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR2CP19387 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2CP19387 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.28■□□□□ 0.36
POLR2CP19387 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.28■□□□□ 0.36
POLR2CP19387 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.28■□□□□ 0.36
POLR2CP19387 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2CP19387 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR2CP19387 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.28■□□□□ 0.36
POLR2CP19387 DUTP2-201ENST00000519164 463 ntBASIC17.28■□□□□ 0.36
POLR2CP19387 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR2CP19387 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR2CP19387 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.28■□□□□ 0.36
POLR2CP19387 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR2CP19387 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.28■□□□□ 0.36
POLR2CP19387 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2CP19387 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.28■□□□□ 0.36
POLR2CP19387 AL138831.2-201ENST00000606564 490 ntBASIC17.28■□□□□ 0.36
POLR2CP19387 TP73-AS1-210ENST00000637775 1455 ntBASIC17.28■□□□□ 0.36
POLR2CP19387 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2CP19387 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR2CP19387 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2CP19387 AC125634.1-201ENST00000438758 1403 ntBASIC17.28■□□□□ 0.36
POLR2CP19387 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2CP19387 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR2CP19387 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
POLR2CP19387 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
POLR2CP19387 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR2CP19387 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2CP19387 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2CP19387 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2CP19387 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2CP19387 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.27■□□□□ 0.36
POLR2CP19387 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.27■□□□□ 0.36
POLR2CP19387 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2CP19387 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.27■□□□□ 0.36
POLR2CP19387 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2CP19387 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2CP19387 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2CP19387 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.27■□□□□ 0.36
POLR2CP19387 RCN1P2-201ENST00000398357 915 ntBASIC17.27■□□□□ 0.36
POLR2CP19387 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2CP19387 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.27■□□□□ 0.36
POLR2CP19387 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.27■□□□□ 0.36
POLR2CP19387 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2CP19387 AC009533.2-201ENST00000543664 586 ntBASIC17.27■□□□□ 0.36
POLR2CP19387 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.27■□□□□ 0.36
POLR2CP19387 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2CP19387 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.27■□□□□ 0.36
POLR2CP19387 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2CP19387 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2CP19387 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2CP19387 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
POLR2CP19387 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.27■□□□□ 0.35
POLR2CP19387 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.27■□□□□ 0.35
POLR2CP19387 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.27■□□□□ 0.35
POLR2CP19387 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
POLR2CP19387 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
POLR2CP19387 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
POLR2CP19387 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR2CP19387 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2CP19387 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR2CP19387 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2CP19387 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
POLR2CP19387 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR2CP19387 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2CP19387 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2CP19387 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2CP19387 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2CP19387 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2CP19387 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2CP19387 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2CP19387 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2CP19387 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR2CP19387 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
POLR2CP19387 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2CP19387 AC004870.1-201ENST00000315132 882 ntBASIC17.26■□□□□ 0.35
POLR2CP19387 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR2CP19387 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2CP19387 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR2CP19387 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR2CP19387 EMBP1-201ENST00000458200 901 ntBASIC17.26■□□□□ 0.35
POLR2CP19387 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.26■□□□□ 0.35
POLR2CP19387 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.26■□□□□ 0.35
POLR2CP19387 MIR5100-201ENST00000579544 119 ntBASIC17.26■□□□□ 0.35
POLR2CP19387 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR2CP19387 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2CP19387 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR2CP19387 AL591684.3-201ENST00000605187 298 ntBASIC17.26■□□□□ 0.35
POLR2CP19387 AC114341.1-201ENST00000618070 349 ntBASIC17.26■□□□□ 0.35
POLR2CP19387 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2CP19387 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
POLR2CP19387 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR2CP19387 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR2CP19387 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms