Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC132008.2-207ENST00000454517 770 ntBASIC18.89■□□□□ 0.61
PTPN1P18031 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.89■□□□□ 0.61
PTPN1P18031 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.89■□□□□ 0.61
PTPN1P18031 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN1P18031 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN1P18031 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.89■□□□□ 0.61
PTPN1P18031 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.89■□□□□ 0.61
PTPN1P18031 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.89■□□□□ 0.61
PTPN1P18031 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN1P18031 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN1P18031 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN1P18031 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.89■□□□□ 0.61
PTPN1P18031 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN1P18031 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN1P18031 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN1P18031 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN1P18031 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN1P18031 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PTPN1P18031 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN1P18031 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.88■□□□□ 0.61
PTPN1P18031 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PTPN1P18031 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN1P18031 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPN1P18031 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
PTPN1P18031 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPN1P18031 FAM220CP-201ENST00000395253 831 ntBASIC18.88■□□□□ 0.61
PTPN1P18031 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN1P18031 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.88■□□□□ 0.61
PTPN1P18031 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.88■□□□□ 0.61
PTPN1P18031 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPN1P18031 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPN1P18031 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.88■□□□□ 0.61
PTPN1P18031 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.88■□□□□ 0.61
PTPN1P18031 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN1P18031 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.88■□□□□ 0.61
PTPN1P18031 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PTPN1P18031 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.88■□□□□ 0.61
PTPN1P18031 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN1P18031 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN1P18031 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PTPN1P18031 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.87■□□□□ 0.61
PTPN1P18031 AC004870.1-201ENST00000315132 882 ntBASIC18.87■□□□□ 0.61
PTPN1P18031 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.87■□□□□ 0.61
PTPN1P18031 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.87■□□□□ 0.61
PTPN1P18031 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.87■□□□□ 0.61
PTPN1P18031 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.87■□□□□ 0.61
PTPN1P18031 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.87■□□□□ 0.61
PTPN1P18031 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PTPN1P18031 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.87■□□□□ 0.61
PTPN1P18031 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PTPN1P18031 AC009949.1-201ENST00000623048 1830 ntBASIC18.87■□□□□ 0.61
PTPN1P18031 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
PTPN1P18031 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.87■□□□□ 0.61
PTPN1P18031 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN1P18031 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PTPN1P18031 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PTPN1P18031 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN1P18031 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PTPN1P18031 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN1P18031 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN1P18031 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms