Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
RETP07949 RFPL4AP1-201ENST00000530883 850 ntBASIC17.99■□□□□ 0.47
RETP07949 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.99■□□□□ 0.47
RETP07949 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
RETP07949 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.99■□□□□ 0.47
RETP07949 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.99■□□□□ 0.47
RETP07949 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.99■□□□□ 0.47
RETP07949 AC092364.2-202ENST00000597012 1073 ntBASIC17.99■□□□□ 0.47
RETP07949 AC011467.2-201ENST00000598425 242 ntBASIC17.99■□□□□ 0.47
RETP07949 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.99■□□□□ 0.47
RETP07949 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
RETP07949 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.99■□□□□ 0.47
RETP07949 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RETP07949 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RETP07949 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RETP07949 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RETP07949 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.98■□□□□ 0.47
RETP07949 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RETP07949 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RETP07949 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.98■□□□□ 0.47
RETP07949 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.98■□□□□ 0.47
RETP07949 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.98■□□□□ 0.47
RETP07949 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.98■□□□□ 0.47
RETP07949 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RETP07949 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.98■□□□□ 0.47
RETP07949 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.98■□□□□ 0.47
RETP07949 AL596442.2-201ENST00000610240 980 ntBASIC17.98■□□□□ 0.47
RETP07949 AL139288.1-201ENST00000623748 933 ntBASIC17.98■□□□□ 0.47
RETP07949 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.98■□□□□ 0.47
RETP07949 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RETP07949 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RETP07949 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.98■□□□□ 0.47
RETP07949 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RETP07949 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RETP07949 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RETP07949 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RETP07949 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.98■□□□□ 0.47
RETP07949 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.98■□□□□ 0.47
RETP07949 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RETP07949 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RETP07949 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.97■□□□□ 0.47
RETP07949 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RETP07949 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RETP07949 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RETP07949 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
RETP07949 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RETP07949 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RETP07949 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RETP07949 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RETP07949 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RETP07949 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RETP07949 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RETP07949 AC023274.1-201ENST00000418278 595 ntBASIC17.97■□□□□ 0.47
RETP07949 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.97■□□□□ 0.47
RETP07949 AC007967.2-201ENST00000432613 625 ntBASIC17.97■□□□□ 0.47
RETP07949 AC068472.1-201ENST00000474589 881 ntBASIC17.97■□□□□ 0.47
RETP07949 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.97■□□□□ 0.47
RETP07949 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.97■□□□□ 0.47
RETP07949 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.97■□□□□ 0.47
RETP07949 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.97■□□□□ 0.47
RETP07949 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.97■□□□□ 0.47
RETP07949 AIRN-201ENST00000601203 4374 ntBASIC17.97■□□□□ 0.47
RETP07949 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RETP07949 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RETP07949 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.97■□□□□ 0.47
RETP07949 FEM1AP3-201ENST00000403722 1741 ntBASIC17.97■□□□□ 0.47
RETP07949 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RETP07949 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RETP07949 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RETP07949 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.97■□□□□ 0.47
RETP07949 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.96■□□□□ 0.47
RETP07949 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RETP07949 NOC2LP1-202ENST00000452600 2235 ntBASIC17.96■□□□□ 0.47
RETP07949 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RETP07949 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RETP07949 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RETP07949 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.96■□□□□ 0.47
RETP07949 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RETP07949 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RETP07949 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RETP07949 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RETP07949 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RETP07949 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RETP07949 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RETP07949 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.96■□□□□ 0.47
RETP07949 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RETP07949 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.96■□□□□ 0.47
RETP07949 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.96■□□□□ 0.47
RETP07949 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.96■□□□□ 0.47
RETP07949 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.96■□□□□ 0.47
RETP07949 SNHG9-202ENST00000564014 471 ntBASIC17.96■□□□□ 0.47
RETP07949 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RETP07949 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RETP07949 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RETP07949 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms