Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSF1RP07333 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CSF1RP07333 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.86■■□□□ 1.09
CSF1RP07333 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CSF1RP07333 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSF1RP07333 AC003669.1-201ENST00000334569 611 ntBASIC21.86■■□□□ 1.09
CSF1RP07333 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSF1RP07333 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.86■■□□□ 1.09
CSF1RP07333 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CSF1RP07333 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CSF1RP07333 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.86■■□□□ 1.09
CSF1RP07333 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CSF1RP07333 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.86■■□□□ 1.09
CSF1RP07333 UNC93B6-202ENST00000528242 690 ntBASIC21.86■■□□□ 1.09
CSF1RP07333 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.86■■□□□ 1.09
CSF1RP07333 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.86■■□□□ 1.09
CSF1RP07333 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.86■■□□□ 1.09
CSF1RP07333 AC117500.6-201ENST00000624871 588 ntBASIC21.86■■□□□ 1.09
CSF1RP07333 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.86■■□□□ 1.09
CSF1RP07333 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.86■■□□□ 1.09
CSF1RP07333 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSF1RP07333 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSF1RP07333 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.86■■□□□ 1.09
CSF1RP07333 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CSF1RP07333 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CSF1RP07333 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CSF1RP07333 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSF1RP07333 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.85■■□□□ 1.09
CSF1RP07333 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
CSF1RP07333 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSF1RP07333 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSF1RP07333 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSF1RP07333 AC005104.2-201ENST00000427818 678 ntBASIC21.85■■□□□ 1.09
CSF1RP07333 POLD2P1-201ENST00000511220 997 ntBASIC21.85■■□□□ 1.09
CSF1RP07333 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.85■■□□□ 1.09
CSF1RP07333 Z83851.2-201ENST00000609564 659 ntBASIC21.85■■□□□ 1.09
CSF1RP07333 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSF1RP07333 AC004706.3-202ENST00000621574 984 ntBASIC21.85■■□□□ 1.09
CSF1RP07333 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
CSF1RP07333 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CSF1RP07333 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CSF1RP07333 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.85■■□□□ 1.09
CSF1RP07333 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSF1RP07333 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSF1RP07333 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSF1RP07333 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSF1RP07333 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSF1RP07333 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.84■■□□□ 1.09
CSF1RP07333 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.84■■□□□ 1.09
CSF1RP07333 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
CSF1RP07333 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.84■■□□□ 1.09
CSF1RP07333 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.84■■□□□ 1.09
CSF1RP07333 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSF1RP07333 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CSF1RP07333 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.84■■□□□ 1.09
CSF1RP07333 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSF1RP07333 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSF1RP07333 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CSF1RP07333 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSF1RP07333 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.84■■□□□ 1.09
CSF1RP07333 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CSF1RP07333 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSF1RP07333 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSF1RP07333 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.84■■□□□ 1.09
CSF1RP07333 AC002558.1-201ENST00000488906 803 ntBASIC21.84■■□□□ 1.09
CSF1RP07333 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.84■■□□□ 1.09
CSF1RP07333 PGAM5P1-201ENST00000518923 814 ntBASIC21.84■■□□□ 1.09
CSF1RP07333 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.84■■□□□ 1.09
CSF1RP07333 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.84■■□□□ 1.09
CSF1RP07333 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.84■■□□□ 1.09
CSF1RP07333 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.84■■□□□ 1.09
CSF1RP07333 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CSF1RP07333 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.84■■□□□ 1.09
CSF1RP07333 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.84■■□□□ 1.09
CSF1RP07333 AL356488.2-201ENST00000602755 427 ntBASIC21.84■■□□□ 1.09
CSF1RP07333 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.84■■□□□ 1.09
CSF1RP07333 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSF1RP07333 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CSF1RP07333 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.84■■□□□ 1.09
CSF1RP07333 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.84■■□□□ 1.09
CSF1RP07333 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSF1RP07333 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CSF1RP07333 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSF1RP07333 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSF1RP07333 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSF1RP07333 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CSF1RP07333 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CSF1RP07333 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CSF1RP07333 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CSF1RP07333 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.83■■□□□ 1.09
CSF1RP07333 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.83■■□□□ 1.09
CSF1RP07333 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSF1RP07333 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CSF1RP07333 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSF1RP07333 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.83■■□□□ 1.09
CSF1RP07333 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.83■■□□□ 1.09
CSF1RP07333 ABALON-201ENST00000629058 1903 ntBASIC21.83■■□□□ 1.09
CSF1RP07333 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.83■■□□□ 1.09
CSF1RP07333 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSF1RP07333 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms