Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.69■□□□□ 0.26
HMGN2P05204 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGN2P05204 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGN2P05204 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGN2P05204 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.69■□□□□ 0.26
HMGN2P05204 AC022616.7-201ENST00000525383 220 ntBASIC16.69■□□□□ 0.26
HMGN2P05204 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.69■□□□□ 0.26
HMGN2P05204 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN2P05204 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN2P05204 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGN2P05204 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN2P05204 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN2P05204 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN2P05204 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGN2P05204 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HMGN2P05204 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
HMGN2P05204 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN2P05204 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGN2P05204 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN2P05204 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
HMGN2P05204 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN2P05204 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
HMGN2P05204 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGN2P05204 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HMGN2P05204 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HMGN2P05204 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN2P05204 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HMGN2P05204 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN2P05204 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGN2P05204 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN2P05204 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN2P05204 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN2P05204 LTB4R2-202ENST00000528054 3092 ntBASIC16.68■□□□□ 0.26
HMGN2P05204 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGN2P05204 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN2P05204 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMGN2P05204 DUX4L26-201ENST00000489078 1255 ntBASIC16.68■□□□□ 0.26
HMGN2P05204 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN2P05204 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN2P05204 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGN2P05204 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN2P05204 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN2P05204 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HMGN2P05204 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGN2P05204 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN2P05204 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
HMGN2P05204 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGN2P05204 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN2P05204 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN2P05204 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGN2P05204 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGN2P05204 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN2P05204 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGN2P05204 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN2P05204 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN2P05204 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN2P05204 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGN2P05204 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGN2P05204 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HMGN2P05204 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN2P05204 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HMGN2P05204 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HMGN2P05204 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN2P05204 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HMGN2P05204 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HMGN2P05204 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGN2P05204 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HMGN2P05204 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN2P05204 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGN2P05204 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN2P05204 TMPOP1-202ENST00000424642 1267 ntBASIC16.67■□□□□ 0.26
HMGN2P05204 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN2P05204 AC112698.1-201ENST00000510299 916 ntBASIC16.67■□□□□ 0.26
HMGN2P05204 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.67■□□□□ 0.26
HMGN2P05204 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
HMGN2P05204 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.67■□□□□ 0.26
HMGN2P05204 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGN2P05204 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.67■□□□□ 0.26
HMGN2P05204 AC005332.3-201ENST00000589904 676 ntBASIC16.67■□□□□ 0.26
HMGN2P05204 AC083849.1-201ENST00000615227 514 ntBASIC16.67■□□□□ 0.26
HMGN2P05204 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN2P05204 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN2P05204 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HMGN2P05204 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN2P05204 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HMGN2P05204 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
HMGN2P05204 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN2P05204 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN2P05204 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HMGN2P05204 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGN2P05204 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGN2P05204 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN2P05204 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN2P05204 PP12613-201ENST00000424958 2230 ntBASIC16.66■□□□□ 0.26
HMGN2P05204 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HMGN2P05204 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HMGN2P05204 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN2P05204 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN2P05204 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGN2P05204 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms