Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
APPP05067 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
APPP05067 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
APPP05067 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
APPP05067 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
APPP05067 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.41■■□□□ 1.02
APPP05067 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
APPP05067 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
APPP05067 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
APPP05067 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
APPP05067 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
APPP05067 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
APPP05067 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
APPP05067 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
APPP05067 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.41■■□□□ 1.02
APPP05067 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
APPP05067 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
APPP05067 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
APPP05067 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
APPP05067 IGHV3-47-201ENST00000425060 335 ntBASIC21.41■■□□□ 1.02
APPP05067 FOSL1P1-201ENST00000511041 816 ntBASIC21.41■■□□□ 1.02
APPP05067 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.41■■□□□ 1.02
APPP05067 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.41■■□□□ 1.02
APPP05067 AC138894.3-201ENST00000603787 634 ntBASIC21.41■■□□□ 1.02
APPP05067 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.41■■□□□ 1.02
APPP05067 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
APPP05067 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
APPP05067 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
APPP05067 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
APPP05067 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
APPP05067 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.41■■□□□ 1.02
APPP05067 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.41■■□□□ 1.02
APPP05067 AC138028.4-201ENST00000564984 1845 ntBASIC21.41■■□□□ 1.02
APPP05067 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
APPP05067 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
APPP05067 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.4■■□□□ 1.02
APPP05067 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
APPP05067 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.4■■□□□ 1.02
APPP05067 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
APPP05067 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
APPP05067 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
APPP05067 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
APPP05067 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
APPP05067 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
APPP05067 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
APPP05067 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
APPP05067 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.4■■□□□ 1.02
APPP05067 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
APPP05067 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
APPP05067 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
APPP05067 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
APPP05067 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
APPP05067 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
APPP05067 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
APPP05067 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.4■■□□□ 1.02
APPP05067 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
APPP05067 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.4■■□□□ 1.02
APPP05067 AC005336.2-201ENST00000593183 939 ntBASIC21.4■■□□□ 1.02
APPP05067 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.4■■□□□ 1.02
APPP05067 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
APPP05067 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
APPP05067 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
APPP05067 AC106820.2-201ENST00000563775 3264 ntBASIC21.4■■□□□ 1.02
APPP05067 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
APPP05067 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
APPP05067 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
APPP05067 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.4■■□□□ 1.02
APPP05067 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
APPP05067 AL390961.4-201ENST00000623958 2535 ntBASIC21.39■■□□□ 1.02
APPP05067 AC100803.2-201ENST00000562459 1963 ntBASIC21.39■■□□□ 1.02
APPP05067 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
APPP05067 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
APPP05067 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
APPP05067 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.39■■□□□ 1.02
APPP05067 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
APPP05067 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
APPP05067 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
APPP05067 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
APPP05067 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
APPP05067 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.39■■□□□ 1.01
APPP05067 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
APPP05067 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
APPP05067 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
APPP05067 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
APPP05067 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
APPP05067 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
APPP05067 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
APPP05067 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
APPP05067 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.39■■□□□ 1.01
APPP05067 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.39■■□□□ 1.01
APPP05067 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.39■■□□□ 1.01
APPP05067 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.39■■□□□ 1.01
APPP05067 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.39■■□□□ 1.01
APPP05067 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.39■■□□□ 1.01
APPP05067 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
APPP05067 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
APPP05067 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
APPP05067 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
APPP05067 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
APPP05067 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms