Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
LTN1O94822 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC23.47■■□□□ 1.35
LTN1O94822 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LTN1O94822 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LTN1O94822 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
LTN1O94822 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
LTN1O94822 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LTN1O94822 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LTN1O94822 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
LTN1O94822 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC23.47■■□□□ 1.35
LTN1O94822 CYB561-216ENST00000582297 897 ntTSL 3 BASIC23.47■■□□□ 1.35
LTN1O94822 AC068137.2-201ENST00000605408 478 ntBASIC23.47■■□□□ 1.35
LTN1O94822 AL590787.1-201ENST00000568856 1315 ntBASIC23.47■■□□□ 1.35
LTN1O94822 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC23.46■■□□□ 1.35
LTN1O94822 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
LTN1O94822 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
LTN1O94822 USP49-202ENST00000373010 2446 ntTSL 5 BASIC23.46■■□□□ 1.35
LTN1O94822 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.46■■□□□ 1.35
LTN1O94822 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
LTN1O94822 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
LTN1O94822 CNN2P11-201ENST00000429351 262 ntBASIC23.46■■□□□ 1.35
LTN1O94822 RHOQP3-201ENST00000437982 621 ntBASIC23.46■■□□□ 1.35
LTN1O94822 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC23.46■■□□□ 1.35
LTN1O94822 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC23.46■■□□□ 1.35
LTN1O94822 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC23.46■■□□□ 1.35
LTN1O94822 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
LTN1O94822 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC23.46■■□□□ 1.35
LTN1O94822 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.46■■□□□ 1.35
LTN1O94822 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC23.46■■□□□ 1.35
LTN1O94822 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.46■■□□□ 1.35
LTN1O94822 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.46■■□□□ 1.35
LTN1O94822 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
LTN1O94822 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
LTN1O94822 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
LTN1O94822 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
LTN1O94822 TSEN15P1-201ENST00000423257 515 ntBASIC23.45■■□□□ 1.34
LTN1O94822 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC23.45■■□□□ 1.34
LTN1O94822 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
LTN1O94822 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
LTN1O94822 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC23.45■■□□□ 1.34
LTN1O94822 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC23.45■■□□□ 1.34
LTN1O94822 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
LTN1O94822 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
LTN1O94822 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
LTN1O94822 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC23.45■■□□□ 1.34
LTN1O94822 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC23.45■■□□□ 1.34
LTN1O94822 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
LTN1O94822 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
LTN1O94822 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC23.45■■□□□ 1.34
LTN1O94822 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
LTN1O94822 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
LTN1O94822 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
LTN1O94822 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
LTN1O94822 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
LTN1O94822 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC23.45■■□□□ 1.34
LTN1O94822 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC23.45■■□□□ 1.34
LTN1O94822 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC23.45■■□□□ 1.34
LTN1O94822 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.34
LTN1O94822 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC23.45■■□□□ 1.34
LTN1O94822 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC23.45■■□□□ 1.34
LTN1O94822 RPL28-205ENST00000558131 444 ntTSL 5 BASIC23.45■■□□□ 1.34
LTN1O94822 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC23.45■■□□□ 1.34
LTN1O94822 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC23.45■■□□□ 1.34
LTN1O94822 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
LTN1O94822 AL353135.1-201ENST00000606729 504 ntBASIC23.45■■□□□ 1.34
LTN1O94822 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
LTN1O94822 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC23.45■■□□□ 1.34
LTN1O94822 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC23.44■■□□□ 1.34
LTN1O94822 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC23.44■■□□□ 1.34
LTN1O94822 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
LTN1O94822 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC23.44■■□□□ 1.34
LTN1O94822 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC23.44■■□□□ 1.34
LTN1O94822 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
LTN1O94822 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC23.44■■□□□ 1.34
LTN1O94822 CYMP-203ENST00000474680 1263 ntBASIC23.44■■□□□ 1.34
LTN1O94822 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC23.44■■□□□ 1.34
LTN1O94822 OR7E47P-204ENST00000575924 449 ntBASIC23.44■■□□□ 1.34
LTN1O94822 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC23.44■■□□□ 1.34
LTN1O94822 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC23.44■■□□□ 1.34
LTN1O94822 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
LTN1O94822 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
LTN1O94822 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
LTN1O94822 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC23.44■■□□□ 1.34
LTN1O94822 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
LTN1O94822 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC23.43■■□□□ 1.34
LTN1O94822 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LTN1O94822 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC23.43■■□□□ 1.34
LTN1O94822 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC23.43■■□□□ 1.34
LTN1O94822 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
LTN1O94822 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LTN1O94822 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LTN1O94822 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LTN1O94822 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC23.43■■□□□ 1.34
LTN1O94822 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
LTN1O94822 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC23.43■■□□□ 1.34
LTN1O94822 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC23.43■■□□□ 1.34
LTN1O94822 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LTN1O94822 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
LTN1O94822 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
LTN1O94822 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms