Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC079781.3-201ENST00000449110 356 ntBASIC18.72■□□□□ 0.59
BEST1O76090 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BEST1O76090 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.72■□□□□ 0.59
BEST1O76090 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.72■□□□□ 0.59
BEST1O76090 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
BEST1O76090 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.72■□□□□ 0.59
BEST1O76090 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.72■□□□□ 0.59
BEST1O76090 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.72■□□□□ 0.59
BEST1O76090 AC018470.1-201ENST00000624790 3129 ntBASIC18.72■□□□□ 0.59
BEST1O76090 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST1O76090 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
BEST1O76090 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST1O76090 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST1O76090 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST1O76090 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
BEST1O76090 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.72■□□□□ 0.59
BEST1O76090 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
BEST1O76090 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BEST1O76090 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
BEST1O76090 AC012317.2-201ENST00000623305 2251 ntBASIC18.71■□□□□ 0.59
BEST1O76090 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
BEST1O76090 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
BEST1O76090 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 COX5BP2-201ENST00000392354 334 ntBASIC18.71■□□□□ 0.59
BEST1O76090 FAM220CP-201ENST00000395253 831 ntBASIC18.71■□□□□ 0.59
BEST1O76090 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.71■□□□□ 0.59
BEST1O76090 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.71■□□□□ 0.59
BEST1O76090 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.71■□□□□ 0.59
BEST1O76090 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.71■□□□□ 0.59
BEST1O76090 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.71■□□□□ 0.59
BEST1O76090 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.71■□□□□ 0.59
BEST1O76090 AP001269.4-201ENST00000609611 512 ntBASIC18.71■□□□□ 0.59
BEST1O76090 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
BEST1O76090 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.71■□□□□ 0.59
BEST1O76090 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.71■□□□□ 0.59
BEST1O76090 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.71■□□□□ 0.59
BEST1O76090 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BEST1O76090 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.58
BEST1O76090 SIRPAP1-201ENST00000448467 1770 ntBASIC18.7■□□□□ 0.58
BEST1O76090 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BEST1O76090 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST1O76090 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BEST1O76090 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.7■□□□□ 0.58
BEST1O76090 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BEST1O76090 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BEST1O76090 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.7■□□□□ 0.58
BEST1O76090 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BEST1O76090 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BEST1O76090 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST1O76090 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
BEST1O76090 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BEST1O76090 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BEST1O76090 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST1O76090 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BEST1O76090 TPM4P1-201ENST00000436100 807 ntBASIC18.7■□□□□ 0.58
BEST1O76090 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.7■□□□□ 0.58
BEST1O76090 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
BEST1O76090 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.7■□□□□ 0.58
BEST1O76090 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.7■□□□□ 0.58
BEST1O76090 LINC01711-201ENST00000598340 967 ntBASIC18.7■□□□□ 0.58
BEST1O76090 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.7■□□□□ 0.58
BEST1O76090 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST1O76090 AL031008.1-201ENST00000619963 541 ntBASIC18.7■□□□□ 0.58
BEST1O76090 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
BEST1O76090 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.7■□□□□ 0.58
BEST1O76090 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
BEST1O76090 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.7■□□□□ 0.58
BEST1O76090 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.69■□□□□ 0.58
BEST1O76090 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
BEST1O76090 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.69■□□□□ 0.58
BEST1O76090 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST1O76090 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST1O76090 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.69■□□□□ 0.58
BEST1O76090 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
BEST1O76090 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST1O76090 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BEST1O76090 AC004870.1-201ENST00000315132 882 ntBASIC18.69■□□□□ 0.58
BEST1O76090 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.69■□□□□ 0.58
BEST1O76090 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BEST1O76090 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.69■□□□□ 0.58
BEST1O76090 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.69■□□□□ 0.58
BEST1O76090 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.69■□□□□ 0.58
BEST1O76090 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
BEST1O76090 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
BEST1O76090 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.69■□□□□ 0.58
BEST1O76090 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms