Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.96■□□□□ 0.15
PFDN1O60925 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.96■□□□□ 0.15
PFDN1O60925 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.96■□□□□ 0.15
PFDN1O60925 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.96■□□□□ 0.15
PFDN1O60925 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PFDN1O60925 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC15.96■□□□□ 0.15
PFDN1O60925 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PFDN1O60925 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.96■□□□□ 0.15
PFDN1O60925 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.96■□□□□ 0.15
PFDN1O60925 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.96■□□□□ 0.15
PFDN1O60925 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.96■□□□□ 0.15
PFDN1O60925 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PFDN1O60925 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.96■□□□□ 0.15
PFDN1O60925 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PFDN1O60925 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
PFDN1O60925 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PFDN1O60925 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PFDN1O60925 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.95■□□□□ 0.14
PFDN1O60925 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PFDN1O60925 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PFDN1O60925 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PFDN1O60925 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PFDN1O60925 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.95■□□□□ 0.14
PFDN1O60925 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PFDN1O60925 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PFDN1O60925 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
PFDN1O60925 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PFDN1O60925 AC004987.1-201ENST00000428627 508 ntBASIC15.95■□□□□ 0.14
PFDN1O60925 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PFDN1O60925 NTF6A-201ENST00000591175 560 ntBASIC15.95■□□□□ 0.14
PFDN1O60925 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PFDN1O60925 AC010997.5-201ENST00000609182 354 ntBASIC15.95■□□□□ 0.14
PFDN1O60925 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PFDN1O60925 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.95■□□□□ 0.14
PFDN1O60925 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.95■□□□□ 0.14
PFDN1O60925 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PFDN1O60925 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PFDN1O60925 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PFDN1O60925 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PFDN1O60925 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PFDN1O60925 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PFDN1O60925 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PFDN1O60925 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PFDN1O60925 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.94■□□□□ 0.14
PFDN1O60925 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 PTBP1P-201ENST00000554374 1601 ntBASIC15.94■□□□□ 0.14
PFDN1O60925 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
PFDN1O60925 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PFDN1O60925 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.94■□□□□ 0.14
PFDN1O60925 OR2I1P-209ENST00000641730 5365 ntBASIC15.94■□□□□ 0.14
PFDN1O60925 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PFDN1O60925 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.94■□□□□ 0.14
PFDN1O60925 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.94■□□□□ 0.14
PFDN1O60925 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.94■□□□□ 0.14
PFDN1O60925 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.94■□□□□ 0.14
PFDN1O60925 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.94■□□□□ 0.14
PFDN1O60925 AL031848.2-201ENST00000607670 837 ntBASIC15.94■□□□□ 0.14
PFDN1O60925 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PFDN1O60925 AL355312.1-201ENST00000407115 2176 ntBASIC15.94■□□□□ 0.14
PFDN1O60925 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.94■□□□□ 0.14
PFDN1O60925 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PFDN1O60925 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PFDN1O60925 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
PFDN1O60925 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms