Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.64■□□□□ 0.9
USP17L11C9JVI0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
USP17L11C9JVI0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.64■□□□□ 0.9
USP17L11C9JVI0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.64■□□□□ 0.9
USP17L11C9JVI0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.64■□□□□ 0.9
USP17L11C9JVI0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP17L11C9JVI0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
USP17L11C9JVI0 AP002414.3-201ENST00000589352 1468 ntBASIC20.64■□□□□ 0.89
USP17L11C9JVI0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP17L11C9JVI0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 BX005266.1-201ENST00000473402 457 ntBASIC20.63■□□□□ 0.89
USP17L11C9JVI0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 UNC93B6-202ENST00000528242 690 ntBASIC20.63■□□□□ 0.89
USP17L11C9JVI0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 AL022326.1-202ENST00000641533 845 ntBASIC20.63■□□□□ 0.89
USP17L11C9JVI0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 AC010460.3-201ENST00000511359 1579 ntBASIC20.63■□□□□ 0.89
USP17L11C9JVI0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP17L11C9JVI0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP17L11C9JVI0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP17L11C9JVI0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP17L11C9JVI0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP17L11C9JVI0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP17L11C9JVI0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
USP17L11C9JVI0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
USP17L11C9JVI0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.62■□□□□ 0.89
USP17L11C9JVI0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.62■□□□□ 0.89
USP17L11C9JVI0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.62■□□□□ 0.89
USP17L11C9JVI0 KRT18P3-201ENST00000451602 1288 ntBASIC20.62■□□□□ 0.89
USP17L11C9JVI0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
USP17L11C9JVI0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP17L11C9JVI0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP17L11C9JVI0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP17L11C9JVI0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms