Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP27XA6NNY8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
USP27XA6NNY8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
USP27XA6NNY8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.28■□□□□ 0.68
USP27XA6NNY8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.28■□□□□ 0.68
USP27XA6NNY8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.28■□□□□ 0.68
USP27XA6NNY8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP27XA6NNY8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.28■□□□□ 0.68
USP27XA6NNY8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.27■□□□□ 0.68
USP27XA6NNY8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP27XA6NNY8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP27XA6NNY8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP27XA6NNY8 AC116353.5-201ENST00000638148 1699 ntBASIC19.27■□□□□ 0.68
USP27XA6NNY8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP27XA6NNY8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.27■□□□□ 0.68
USP27XA6NNY8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
USP27XA6NNY8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP27XA6NNY8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.27■□□□□ 0.68
USP27XA6NNY8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP27XA6NNY8 AC069152.1-201ENST00000438030 544 ntBASIC19.27■□□□□ 0.68
USP27XA6NNY8 KSR1P1-201ENST00000446298 240 ntBASIC19.27■□□□□ 0.68
USP27XA6NNY8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.27■□□□□ 0.68
USP27XA6NNY8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.27■□□□□ 0.68
USP27XA6NNY8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP27XA6NNY8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.27■□□□□ 0.68
USP27XA6NNY8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.27■□□□□ 0.68
USP27XA6NNY8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.27■□□□□ 0.68
USP27XA6NNY8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP27XA6NNY8 AL353708.3-201ENST00000610272 989 ntBASIC19.27■□□□□ 0.68
USP27XA6NNY8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP27XA6NNY8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP27XA6NNY8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
USP27XA6NNY8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.27■□□□□ 0.67
USP27XA6NNY8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
USP27XA6NNY8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP27XA6NNY8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.26■□□□□ 0.67
USP27XA6NNY8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP27XA6NNY8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP27XA6NNY8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
USP27XA6NNY8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP27XA6NNY8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
USP27XA6NNY8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP27XA6NNY8 AC026691.1-201ENST00000602502 2017 ntBASIC19.26■□□□□ 0.67
USP27XA6NNY8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP27XA6NNY8 AP002982.1-201ENST00000492365 877 ntBASIC19.26■□□□□ 0.67
USP27XA6NNY8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP27XA6NNY8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.26■□□□□ 0.67
USP27XA6NNY8 AC124016.1-201ENST00000609552 612 ntBASIC19.26■□□□□ 0.67
USP27XA6NNY8 AL109923.1-201ENST00000618799 583 ntBASIC19.26■□□□□ 0.67
USP27XA6NNY8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.26■□□□□ 0.67
USP27XA6NNY8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP27XA6NNY8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP27XA6NNY8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP27XA6NNY8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.26■□□□□ 0.67
USP27XA6NNY8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
USP27XA6NNY8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
USP27XA6NNY8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
USP27XA6NNY8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP27XA6NNY8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP27XA6NNY8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
USP27XA6NNY8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP27XA6NNY8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP27XA6NNY8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
USP27XA6NNY8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.25■□□□□ 0.67
USP27XA6NNY8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.25■□□□□ 0.67
USP27XA6NNY8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.25■□□□□ 0.67
USP27XA6NNY8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
USP27XA6NNY8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.25■□□□□ 0.67
USP27XA6NNY8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 B3GAT3P1-201ENST00000471720 806 ntBASIC19.25■□□□□ 0.67
USP27XA6NNY8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.25■□□□□ 0.67
USP27XA6NNY8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.25■□□□□ 0.67
USP27XA6NNY8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
USP27XA6NNY8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
USP27XA6NNY8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.25■□□□□ 0.67
USP27XA6NNY8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
USP27XA6NNY8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
USP27XA6NNY8 KRT16P1-201ENST00000399124 1418 ntBASIC19.25■□□□□ 0.67
USP27XA6NNY8 HOXB1-202ENST00000577092 1414 ntBASIC19.25■□□□□ 0.67
USP27XA6NNY8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.25■□□□□ 0.67
USP27XA6NNY8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.25■□□□□ 0.67
USP27XA6NNY8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP27XA6NNY8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP27XA6NNY8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms