Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TVP23AA6NH52 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TVP23AA6NH52 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TVP23AA6NH52 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TVP23AA6NH52 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TVP23AA6NH52 DUTP2-201ENST00000519164 463 ntBASIC15.98■□□□□ 0.15
TVP23AA6NH52 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TVP23AA6NH52 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TVP23AA6NH52 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TVP23AA6NH52 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TVP23AA6NH52 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TVP23AA6NH52 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 LINC00602-201ENST00000629776 2065 ntBASIC15.98■□□□□ 0.15
TVP23AA6NH52 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TVP23AA6NH52 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TVP23AA6NH52 AC108860.2-201ENST00000562760 2183 ntBASIC15.97■□□□□ 0.15
TVP23AA6NH52 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
TVP23AA6NH52 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.97■□□□□ 0.15
TVP23AA6NH52 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TVP23AA6NH52 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TVP23AA6NH52 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TVP23AA6NH52 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TVP23AA6NH52 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.97■□□□□ 0.15
TVP23AA6NH52 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TVP23AA6NH52 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TVP23AA6NH52 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TVP23AA6NH52 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.97■□□□□ 0.15
TVP23AA6NH52 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TVP23AA6NH52 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
TVP23AA6NH52 NEK4P2-201ENST00000580004 1012 ntBASIC15.97■□□□□ 0.15
TVP23AA6NH52 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.97■□□□□ 0.15
TVP23AA6NH52 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.97■□□□□ 0.15
TVP23AA6NH52 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TVP23AA6NH52 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TVP23AA6NH52 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TVP23AA6NH52 OR6D1P-203ENST00000641209 4860 ntBASIC15.97■□□□□ 0.15
TVP23AA6NH52 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.97■□□□□ 0.15
TVP23AA6NH52 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TVP23AA6NH52 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.97■□□□□ 0.15
TVP23AA6NH52 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TVP23AA6NH52 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TVP23AA6NH52 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
TVP23AA6NH52 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
TVP23AA6NH52 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 LINC00167-201ENST00000530583 1419 ntBASIC15.96■□□□□ 0.15
TVP23AA6NH52 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.96■□□□□ 0.15
TVP23AA6NH52 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.96■□□□□ 0.15
TVP23AA6NH52 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.96■□□□□ 0.15
TVP23AA6NH52 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 AL596275.1-201ENST00000423464 877 ntBASIC15.96■□□□□ 0.15
TVP23AA6NH52 ECEL1P3-201ENST00000427961 737 ntBASIC15.96■□□□□ 0.15
TVP23AA6NH52 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.96■□□□□ 0.15
TVP23AA6NH52 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.96■□□□□ 0.15
TVP23AA6NH52 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.96■□□□□ 0.15
TVP23AA6NH52 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.96■□□□□ 0.15
TVP23AA6NH52 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
TVP23AA6NH52 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
TVP23AA6NH52 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TVP23AA6NH52 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.96■□□□□ 0.15
TVP23AA6NH52 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TVP23AA6NH52 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
TVP23AA6NH52 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TVP23AA6NH52 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
TVP23AA6NH52 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TVP23AA6NH52 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.95■□□□□ 0.14
TVP23AA6NH52 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.95■□□□□ 0.14
TVP23AA6NH52 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms