Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SYCE3A1L190 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SYCE3A1L190 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
SYCE3A1L190 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
SYCE3A1L190 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYCE3A1L190 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYCE3A1L190 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYCE3A1L190 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYCE3A1L190 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.34■□□□□ 0.85
SYCE3A1L190 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SYCE3A1L190 MESTP1-201ENST00000404287 994 ntBASIC20.34■□□□□ 0.85
SYCE3A1L190 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYCE3A1L190 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SYCE3A1L190 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYCE3A1L190 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SYCE3A1L190 KRT18P23-201ENST00000435622 1283 ntBASIC20.34■□□□□ 0.85
SYCE3A1L190 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.34■□□□□ 0.85
SYCE3A1L190 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.34■□□□□ 0.85
SYCE3A1L190 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.34■□□□□ 0.85
SYCE3A1L190 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.34■□□□□ 0.85
SYCE3A1L190 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
SYCE3A1L190 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.34■□□□□ 0.85
SYCE3A1L190 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.34■□□□□ 0.85
SYCE3A1L190 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYCE3A1L190 LINC02199-201ENST00000506655 2702 ntBASIC20.34■□□□□ 0.85
SYCE3A1L190 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYCE3A1L190 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYCE3A1L190 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SYCE3A1L190 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SYCE3A1L190 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SYCE3A1L190 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.34■□□□□ 0.85
SYCE3A1L190 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
SYCE3A1L190 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SYCE3A1L190 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.33■□□□□ 0.85
SYCE3A1L190 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SYCE3A1L190 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SYCE3A1L190 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SYCE3A1L190 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SYCE3A1L190 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SYCE3A1L190 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SYCE3A1L190 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SYCE3A1L190 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SYCE3A1L190 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.33■□□□□ 0.85
SYCE3A1L190 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.33■□□□□ 0.85
SYCE3A1L190 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.33■□□□□ 0.85
SYCE3A1L190 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.33■□□□□ 0.85
SYCE3A1L190 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SYCE3A1L190 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.33■□□□□ 0.85
SYCE3A1L190 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SYCE3A1L190 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.33■□□□□ 0.84
SYCE3A1L190 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SYCE3A1L190 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SYCE3A1L190 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SYCE3A1L190 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SYCE3A1L190 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
SYCE3A1L190 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SYCE3A1L190 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SYCE3A1L190 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
SYCE3A1L190 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SYCE3A1L190 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SYCE3A1L190 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.32■□□□□ 0.84
SYCE3A1L190 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYCE3A1L190 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SYCE3A1L190 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.32■□□□□ 0.84
SYCE3A1L190 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYCE3A1L190 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.32■□□□□ 0.84
SYCE3A1L190 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SYCE3A1L190 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYCE3A1L190 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYCE3A1L190 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.32■□□□□ 0.84
SYCE3A1L190 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYCE3A1L190 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
SYCE3A1L190 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SYCE3A1L190 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.32■□□□□ 0.84
SYCE3A1L190 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SYCE3A1L190 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.32■□□□□ 0.84
SYCE3A1L190 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYCE3A1L190 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.32■□□□□ 0.84
SYCE3A1L190 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.32■□□□□ 0.84
SYCE3A1L190 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYCE3A1L190 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYCE3A1L190 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYCE3A1L190 AC096733.2-201ENST00000609937 1394 ntBASIC20.32■□□□□ 0.84
SYCE3A1L190 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYCE3A1L190 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.31■□□□□ 0.84
SYCE3A1L190 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.31■□□□□ 0.84
SYCE3A1L190 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SYCE3A1L190 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SYCE3A1L190 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.31■□□□□ 0.84
SYCE3A1L190 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SYCE3A1L190 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms