Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 LINC00167-201ENST00000530583 1419 ntBASIC15.57■□□□□ 0.08
SHISA3A0PJX4 KRT8P7-201ENST00000533003 1432 ntBASIC15.57■□□□□ 0.08
SHISA3A0PJX4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 FSCN1P1-201ENST00000568912 1481 ntBASIC15.57■□□□□ 0.08
SHISA3A0PJX4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.56■□□□□ 0.08
SHISA3A0PJX4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 AL353807.1-201ENST00000427475 662 ntBASIC15.56■□□□□ 0.08
SHISA3A0PJX4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 RNA5SP413-201ENST00000516373 109 ntBASIC15.56■□□□□ 0.08
SHISA3A0PJX4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 AC073195.1-201ENST00000607241 877 ntBASIC15.56■□□□□ 0.08
SHISA3A0PJX4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 AC092171.3-201ENST00000610122 2651 ntBASIC15.56■□□□□ 0.08
SHISA3A0PJX4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHISA3A0PJX4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 RNF216P1-203ENST00000404404 2427 ntBASIC15.55■□□□□ 0.08
SHISA3A0PJX4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHISA3A0PJX4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms