Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 AC026366.1-201ENST00000488803 879 ntBASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 AC142086.2-201ENST00000569753 217 ntBASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 LINC00167-201ENST00000530583 1419 ntBASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 DDX43P3-201ENST00000441064 443 ntBASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 AC104390.1-201ENST00000555663 520 ntBASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 FSCN1P1-201ENST00000568912 1481 ntBASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV3S1A0A5B6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TCRBV3S1A0A5B6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 AC026691.1-201ENST00000602502 2017 ntBASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV3S1A0A5B6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms