Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV30A0A087WSZ9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV30A0A087WSZ9 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV30A0A087WSZ9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.08□□□□□ -0.16
TRAV30A0A087WSZ9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV30A0A087WSZ9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV30A0A087WSZ9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV30A0A087WSZ9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV30A0A087WSZ9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV30A0A087WSZ9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRAV30A0A087WSZ9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV30A0A087WSZ9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 AC006116.8-202ENST00000587620 1550 ntBASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 AC099343.3-201ENST00000605834 2503 ntBASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV30A0A087WSZ9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 PVRIG2P-201ENST00000435460 978 ntBASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 SIRPAP1-201ENST00000448467 1770 ntBASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 AL596257.1-201ENST00000641463 2694 ntBASIC14.06□□□□□ -0.16
TRAV30A0A087WSZ9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms