Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 SDHAP1-207ENST00000440850 2000 ntBASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
LINC01558Q9Y6Z2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 AC005915.1-201ENST00000624912 2018 ntBASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 AL161772.1-201ENST00000610494 4412 ntBASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01558Q9Y6Z2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 AC112777.1-201ENST00000540175 1423 ntBASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 AC097376.2-205ENST00000610159 5334 ntBASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 AC087386.2-201ENST00000623212 4637 ntBASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
LINC01558Q9Y6Z2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms