Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 SPDYE15P-201ENST00000424157 909 ntBASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 HLA-F-220ENST00000434407 884 ntBASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGA11Q9Y5H2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 KRT18P48-201ENST00000434763 852 ntBASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 KRT18P57-201ENST00000443599 1254 ntBASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 TNRC18P3-201ENST00000441896 2691 ntBASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHGA11Q9Y5H2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 AK4P3-201ENST00000418260 669 ntBASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA11Q9Y5H2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms