Protein–RNA interactions for Protein: Q9Y4X4

KLF12, Krueppel-like factor 12, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF12Q9Y4X4 CD177P1-201ENST00000606252 935 ntBASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 LINC01451-201ENST00000623792 534 ntBASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
KLF12Q9Y4X4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 AL024508.2-201ENST00000607749 1894 ntBASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 GCSHP5-201ENST00000443090 522 ntBASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 B3GAT3P1-201ENST00000471720 806 ntBASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 AC009065.1-201ENST00000564055 1225 ntBASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 FSCN1P1-201ENST00000568912 1481 ntBASIC13.61□□□□□ -0.23
KLF12Q9Y4X4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 UBE2SP1-201ENST00000450587 669 ntBASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 AP000692.2-201ENST00000608391 879 ntBASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 AC018695.7-201ENST00000624587 2492 ntBASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
KLF12Q9Y4X4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms