Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC126763.1-201ENST00000552015 2118 ntBASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 ABALON-201ENST00000629058 1903 ntBASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 MYLKP1-201ENST00000509077 1580 ntBASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HDAC6Q9UBN7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 AC132008.2-207ENST00000454517 770 ntBASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 AC068472.1-201ENST00000474589 881 ntBASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 AC005336.2-201ENST00000593183 939 ntBASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 AL024508.2-201ENST00000607749 1894 ntBASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HDAC6Q9UBN7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 RCN1P2-201ENST00000398357 915 ntBASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 AP001005.1-201ENST00000571755 1248 ntBASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 AC008687.5-201ENST00000593746 558 ntBASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 AL671883.3-201ENST00000603274 991 ntBASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 AC064862.7-201ENST00000604520 867 ntBASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HDAC6Q9UBN7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 AL773604.1-201ENST00000617417 272 ntBASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HDAC6Q9UBN7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
HDAC6Q9UBN7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms