Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.82■□□□□ 0.12
VRK1Q99986 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 FER1L4-210ENST00000615531 5998 ntBASIC15.81■□□□□ 0.12
VRK1Q99986 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
VRK1Q99986 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.81■□□□□ 0.12
VRK1Q99986 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
VRK1Q99986 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VRK1Q99986 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
VRK1Q99986 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.81■□□□□ 0.12
VRK1Q99986 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 HCG4P8-203ENST00000443049 980 ntBASIC15.81■□□□□ 0.12
VRK1Q99986 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.81■□□□□ 0.12
VRK1Q99986 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
VRK1Q99986 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.81■□□□□ 0.12
VRK1Q99986 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.81■□□□□ 0.12
VRK1Q99986 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.81■□□□□ 0.12
VRK1Q99986 AC034236.2-201ENST00000606662 1610 ntBASIC15.81■□□□□ 0.12
VRK1Q99986 LINC00896-202ENST00000609602 2128 ntBASIC15.81■□□□□ 0.12
VRK1Q99986 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VRK1Q99986 PCDHA12-202ENST00000613593 2588 ntBASIC15.81■□□□□ 0.12
VRK1Q99986 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VRK1Q99986 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.8■□□□□ 0.12
VRK1Q99986 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.8■□□□□ 0.12
VRK1Q99986 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.8■□□□□ 0.12
VRK1Q99986 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
VRK1Q99986 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.8■□□□□ 0.12
VRK1Q99986 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.8■□□□□ 0.12
VRK1Q99986 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.8■□□□□ 0.12
VRK1Q99986 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.8■□□□□ 0.12
VRK1Q99986 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.8■□□□□ 0.12
VRK1Q99986 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.8■□□□□ 0.12
VRK1Q99986 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
VRK1Q99986 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.8■□□□□ 0.12
VRK1Q99986 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
VRK1Q99986 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
VRK1Q99986 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
VRK1Q99986 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
VRK1Q99986 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
VRK1Q99986 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 ANO7L1-203ENST00000602586 1720 ntBASIC15.8■□□□□ 0.12
VRK1Q99986 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VRK1Q99986 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VRK1Q99986 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VRK1Q99986 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VRK1Q99986 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.79■□□□□ 0.12
VRK1Q99986 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VRK1Q99986 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VRK1Q99986 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VRK1Q99986 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VRK1Q99986 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.79■□□□□ 0.12
VRK1Q99986 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VRK1Q99986 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VRK1Q99986 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
VRK1Q99986 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
VRK1Q99986 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.79■□□□□ 0.12
VRK1Q99986 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.79■□□□□ 0.12
VRK1Q99986 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VRK1Q99986 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms