Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.89■□□□□ 0.45
CPNE1Q99829 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE1Q99829 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE1Q99829 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE1Q99829 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.88■□□□□ 0.45
CPNE1Q99829 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CPNE1Q99829 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.88■□□□□ 0.45
CPNE1Q99829 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.88■□□□□ 0.45
CPNE1Q99829 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.88■□□□□ 0.45
CPNE1Q99829 AC080080.1-201ENST00000625121 2420 ntBASIC17.88■□□□□ 0.45
CPNE1Q99829 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.88■□□□□ 0.45
CPNE1Q99829 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.88■□□□□ 0.45
CPNE1Q99829 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.88■□□□□ 0.45
CPNE1Q99829 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CPNE1Q99829 KRT18P65-201ENST00000439811 1286 ntBASIC17.88■□□□□ 0.45
CPNE1Q99829 DDX43P3-201ENST00000441064 443 ntBASIC17.88■□□□□ 0.45
CPNE1Q99829 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.88■□□□□ 0.45
CPNE1Q99829 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.88■□□□□ 0.45
CPNE1Q99829 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.88■□□□□ 0.45
CPNE1Q99829 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.88■□□□□ 0.45
CPNE1Q99829 LINC01568-207ENST00000641790 1380 ntBASIC17.88■□□□□ 0.45
CPNE1Q99829 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.88■□□□□ 0.45
CPNE1Q99829 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE1Q99829 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE1Q99829 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE1Q99829 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.87■□□□□ 0.45
CPNE1Q99829 CROCCP2-202ENST00000412962 2773 ntBASIC17.87■□□□□ 0.45
CPNE1Q99829 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE1Q99829 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CPNE1Q99829 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE1Q99829 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE1Q99829 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE1Q99829 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.87■□□□□ 0.45
CPNE1Q99829 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE1Q99829 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CPNE1Q99829 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE1Q99829 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE1Q99829 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE1Q99829 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CPNE1Q99829 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.87■□□□□ 0.45
CPNE1Q99829 AC024563.2-201ENST00000603282 481 ntBASIC17.87■□□□□ 0.45
CPNE1Q99829 AC141257.4-201ENST00000634557 245 ntBASIC17.87■□□□□ 0.45
CPNE1Q99829 AC136944.6-201ENST00000634818 245 ntBASIC17.87■□□□□ 0.45
CPNE1Q99829 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE1Q99829 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE1Q99829 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE1Q99829 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE1Q99829 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CPNE1Q99829 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE1Q99829 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.87■□□□□ 0.45
CPNE1Q99829 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CPNE1Q99829 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.87■□□□□ 0.45
CPNE1Q99829 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE1Q99829 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CPNE1Q99829 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE1Q99829 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE1Q99829 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE1Q99829 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE1Q99829 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CPNE1Q99829 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE1Q99829 AP001094.4-201ENST00000579008 2176 ntBASIC17.86■□□□□ 0.45
CPNE1Q99829 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.86■□□□□ 0.45
CPNE1Q99829 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE1Q99829 AC009053.2-201ENST00000563701 2365 ntBASIC17.86■□□□□ 0.45
CPNE1Q99829 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE1Q99829 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.86■□□□□ 0.45
CPNE1Q99829 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE1Q99829 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.86■□□□□ 0.45
CPNE1Q99829 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.86■□□□□ 0.45
CPNE1Q99829 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE1Q99829 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.86■□□□□ 0.45
CPNE1Q99829 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE1Q99829 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.86■□□□□ 0.45
CPNE1Q99829 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.86■□□□□ 0.45
CPNE1Q99829 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.86■□□□□ 0.45
CPNE1Q99829 GCSHP2-201ENST00000560971 527 ntBASIC17.86■□□□□ 0.45
CPNE1Q99829 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.86■□□□□ 0.45
CPNE1Q99829 KRT18P22-201ENST00000402024 1347 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms