Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 AC008608.2-201ENST00000606089 416 ntBASIC19.25■□□□□ 0.67
SNX27Q96L92 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.25■□□□□ 0.67
SNX27Q96L92 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 FLJ13224-201ENST00000313737 1514 ntBASIC19.25■□□□□ 0.67
SNX27Q96L92 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX27Q96L92 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX27Q96L92 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX27Q96L92 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.24■□□□□ 0.67
SNX27Q96L92 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SNX27Q96L92 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX27Q96L92 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SNX27Q96L92 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX27Q96L92 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX27Q96L92 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX27Q96L92 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX27Q96L92 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX27Q96L92 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.24■□□□□ 0.67
SNX27Q96L92 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX27Q96L92 ABCD1P5-201ENST00000445663 754 ntBASIC19.24■□□□□ 0.67
SNX27Q96L92 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX27Q96L92 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX27Q96L92 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX27Q96L92 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX27Q96L92 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.24■□□□□ 0.67
SNX27Q96L92 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
SNX27Q96L92 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX27Q96L92 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.24■□□□□ 0.67
SNX27Q96L92 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.24■□□□□ 0.67
SNX27Q96L92 AL355877.3-201ENST00000622820 899 ntBASIC19.24■□□□□ 0.67
SNX27Q96L92 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.24■□□□□ 0.67
SNX27Q96L92 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX27Q96L92 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX27Q96L92 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX27Q96L92 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX27Q96L92 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SNX27Q96L92 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX27Q96L92 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
SNX27Q96L92 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX27Q96L92 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX27Q96L92 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SNX27Q96L92 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.23■□□□□ 0.67
SNX27Q96L92 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX27Q96L92 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX27Q96L92 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX27Q96L92 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
SNX27Q96L92 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX27Q96L92 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.23■□□□□ 0.67
SNX27Q96L92 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX27Q96L92 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SNX27Q96L92 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.23■□□□□ 0.67
SNX27Q96L92 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX27Q96L92 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.23■□□□□ 0.67
SNX27Q96L92 FGFR3P6-201ENST00000457012 610 ntBASIC19.23■□□□□ 0.67
SNX27Q96L92 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.23■□□□□ 0.67
SNX27Q96L92 AC122714.2-201ENST00000502787 707 ntBASIC19.23■□□□□ 0.67
SNX27Q96L92 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.23■□□□□ 0.67
SNX27Q96L92 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX27Q96L92 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX27Q96L92 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
SNX27Q96L92 ABALON-201ENST00000629058 1903 ntBASIC19.23■□□□□ 0.67
SNX27Q96L92 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX27Q96L92 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SNX27Q96L92 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX27Q96L92 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX27Q96L92 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX27Q96L92 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SNX27Q96L92 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX27Q96L92 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SNX27Q96L92 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX27Q96L92 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX27Q96L92 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.22■□□□□ 0.67
SNX27Q96L92 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX27Q96L92 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.22■□□□□ 0.67
SNX27Q96L92 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.22■□□□□ 0.67
SNX27Q96L92 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX27Q96L92 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX27Q96L92 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms