Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 TMPOP1-202ENST00000424642 1267 ntBASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 AC005332.3-201ENST00000589904 676 ntBASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 BCL2-203ENST00000589955 5011 ntBASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 AC112698.1-201ENST00000510299 916 ntBASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 RNF126P1-202ENST00000569893 925 ntBASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 AL390719.2-201ENST00000606993 987 ntBASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RHBDF1Q96CC6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 AL671277.2-201ENST00000458060 996 ntBASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RHBDF1Q96CC6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RHBDF1Q96CC6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RHBDF1Q96CC6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
RHBDF1Q96CC6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
RHBDF1Q96CC6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.39■□□□□ 0.38
RHBDF1Q96CC6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RHBDF1Q96CC6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.39■□□□□ 0.38
RHBDF1Q96CC6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
RHBDF1Q96CC6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 LINC01238-205ENST00000567549 1107 ntBASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RHBDF1Q96CC6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms