Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
C3orf56Q8N813 AP000867.4-201ENST00000641616 219 ntBASIC13.97□□□□□ -0.17
C3orf56Q8N813 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C3orf56Q8N813 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
C3orf56Q8N813 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C3orf56Q8N813 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C3orf56Q8N813 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
C3orf56Q8N813 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C3orf56Q8N813 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C3orf56Q8N813 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C3orf56Q8N813 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C3orf56Q8N813 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C3orf56Q8N813 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
C3orf56Q8N813 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.97□□□□□ -0.17
C3orf56Q8N813 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.97□□□□□ -0.17
C3orf56Q8N813 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C3orf56Q8N813 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C3orf56Q8N813 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C3orf56Q8N813 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.97□□□□□ -0.17
C3orf56Q8N813 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 LINC00602-201ENST00000629776 2065 ntBASIC13.96□□□□□ -0.17
C3orf56Q8N813 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 MIR4751-201ENST00000578027 74 ntBASIC13.96□□□□□ -0.17
C3orf56Q8N813 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C3orf56Q8N813 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.96□□□□□ -0.17
C3orf56Q8N813 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
C3orf56Q8N813 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.96□□□□□ -0.18
C3orf56Q8N813 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
C3orf56Q8N813 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
C3orf56Q8N813 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
C3orf56Q8N813 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
C3orf56Q8N813 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
C3orf56Q8N813 ELL2P1-201ENST00000413990 1906 ntBASIC13.96□□□□□ -0.18
C3orf56Q8N813 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C3orf56Q8N813 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
C3orf56Q8N813 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
C3orf56Q8N813 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
C3orf56Q8N813 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C3orf56Q8N813 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
C3orf56Q8N813 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C3orf56Q8N813 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
C3orf56Q8N813 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
C3orf56Q8N813 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
C3orf56Q8N813 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
C3orf56Q8N813 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
C3orf56Q8N813 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C3orf56Q8N813 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C3orf56Q8N813 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.95□□□□□ -0.18
C3orf56Q8N813 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.95□□□□□ -0.18
C3orf56Q8N813 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.95□□□□□ -0.18
C3orf56Q8N813 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.95□□□□□ -0.18
C3orf56Q8N813 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.95□□□□□ -0.18
C3orf56Q8N813 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.95□□□□□ -0.18
C3orf56Q8N813 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.95□□□□□ -0.18
C3orf56Q8N813 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
C3orf56Q8N813 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.95□□□□□ -0.18
C3orf56Q8N813 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.95□□□□□ -0.18
C3orf56Q8N813 KRT18P41-201ENST00000518924 1277 ntBASIC13.95□□□□□ -0.18
C3orf56Q8N813 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.95□□□□□ -0.18
C3orf56Q8N813 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.95□□□□□ -0.18
C3orf56Q8N813 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
C3orf56Q8N813 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.95□□□□□ -0.18
C3orf56Q8N813 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
C3orf56Q8N813 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.95□□□□□ -0.18
C3orf56Q8N813 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms